RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 NUP85Q9BW27 656 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 SPATA16Q9BXB7 569 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 NAA15Q9BXJ9 866 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 ANGPTL4Q9BY76 406 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 SRMSQ9H3Y6 488 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 TRIM45Q9H8W5 580 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 ZDHHC11Q9H8X9 412 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 SH2D2AQ9NP31 389 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 IRAK4Q9NWZ3 460 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 SPRR3Q9UBC9 169 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 TEKT2Q9UIF3 430 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 PLCL2Q9UPR0 1127 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 TESMINQ9Y4I5 508 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 MALRD1Q5VYJ5 2156 aa6.31□□□□□ -1.4
CTNNA1-216ENST00000519489 GTPBP10A4D1E9 387 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 OR2W5A6NFC9 320 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 C2orf81A6NN90 581 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 HSPB2A8KAH6 182 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 FAM166BA8MTA8 275 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 LINC01387J3KSC0 135 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 OVOL3O00110 214 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 MATN3O15232 486 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 PLAUP00749 431 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 IGHV4-39P01824 125 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 IGHG3P01860 377 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 RPLP1P05386 114 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 UGT1A1P22309 533 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 CD68P34810 354 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 GABRB2P47870 512 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 ITGA8P53708 1063 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 DCDC1P59894 354 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 AMPD3Q01432 767 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 HSPB2Q16082 182 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 BTBD16Q32M84 506 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 TCERG1LQ5VWI1 586 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 PLAG1Q6DJT9 500 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 TTI2Q6NXR4 508 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 ABHD17CQ6PCB6 329 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 GJB7Q6PEY0 223 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 PHC3Q8NDX5 983 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 OR52E1Q8NGJ3 308 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 JOSD2Q8TAC2 188 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 DLG3Q92796 817 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 ZNF285Q96NJ3 590 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 TNFRSF13CQ96RJ3 184 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 ZFYVE21Q9BQ24 234 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 MGME1Q9BQP7 344 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 TUBB6Q9BUF5 446 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 ZNF747Q9BV97 191 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 CEP41Q9BYV8 373 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 THAP2Q9H0W7 228 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 RASSF4Q9H2L5 321 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 CDCP1Q9H5V8 836 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 CHODLQ9H9P2 273 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 ALKBH4Q9NXW9 302 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 PSD3Q9NYI0 1048 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 MTRF1LQ9UGC7 380 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 CHKBQ9Y259 395 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 EIF3LQ9Y262 564 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 DNAH3Q8TD57 4116 aa6.3□□□□□ -1.4
CTNNA1-216ENST00000519489 C1orf232A0A0U1RR37 186 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 A0A1B0GVC2 190 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 FITM1A5D6W6 292 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 C2orf74A8MZ97 194 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 FAM157AC9JC47 383 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 MATN2O00339 956 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 DVL2O14641 736 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 BCKDKO14874 412 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 MED7O43513 233 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 NRP2O60462 931 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 STX10O60499 249 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 SUN1O94901 812 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 CXCR2P25025 360 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 TPP2P29144 1249 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 PBLDP30039 288 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 GRIA3P42263 894 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 FMO5P49326 533 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 ARSFP54793 590 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 ACTG1P63261 375 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 IRX6P78412 446 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 OCRLQ01968 901 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 APBA1Q02410 837 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 GCNT1Q02742 428 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 IL10RBQ08334 325 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 FOXO1Q12778 655 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 TMEM115Q12893 351 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 RFTN1Q14699 578 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 SYT16Q17RD7 645 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 TRILQ7L0X0 811 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 KIF2BQ8N4N8 673 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 ACVR1CQ8NER5 493 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 TMEM171Q8WVE6 324 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 RXFP2Q8WXD0 754 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 CENPIQ92674 756 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 GCDHQ92947 438 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 ISL2Q96A47 359 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 REPS1Q96D71 796 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 WFIKKN1Q96NZ8 548 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 LYSMD1Q96S90 227 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 SCN2AQ99250 2005 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms