RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PDE10AQ9Y233 779 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 VWA7Q9Y334 891 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 SNX24Q9Y343 169 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 PTRH2Q9Y3E5 179 aaKnown RBP8.94□□□□□ -0.98
HDAC3-215ENST00000519474 PCDHGA9Q9Y5G4 932 aaKnown RBP8.94□□□□□ -0.98
HDAC3-215ENST00000519474 PCSK5Q92824 1860 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 ANKRD12Q6UB98 2062 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 ATMQ13315 3056 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 HYKKA2RU49 373 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 EFCAB8A8MWE9 144 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 C9J4A7 227 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 E7ESA3 106 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 H0YGG7 62 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 MASP2O00187 686 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 EIF3FO00303 357 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 DSCR3O14972 297 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 VPS26AO75436 327 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 SEC31AO94979 1220 aaKnown RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 SYF2O95926 243 aaKnown RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 ALBP02768 609 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 IMPA1P29218 277 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 RPA3P35244 121 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 CASRP41180 1078 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 RPL21P46778 160 aaKnown RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 OR1D4P47884 311 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 ARF3P61204 181 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 KCNC4Q03721 635 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 RELAQ04206 551 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 TLE1Q04724 770 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 SLC9A5Q14940 896 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 IGFBP7Q16270 282 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 PRTGQ2VWP7 1150 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 YOD1Q5VVQ6 348 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 UGT3A1Q6NUS8 523 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 KIAA0408Q6ZU52 694 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 UBE2R2Q712K3 238 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 MED25Q71SY5 747 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 RNF44Q7L0R7 432 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 CCDC91Q7Z6B0 441 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 PAQR7Q86WK9 346 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 ANKMY2Q8IV38 441 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 IQCF2Q8IXL9 164 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 C17orf53Q8N3J3 647 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 TMEM102Q8N9M5 508 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 TEX19Q8NA77 164 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 SPATA4Q8NEY3 305 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 FDCSPQ8NFU4 85 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 OR2Y1Q8NGV0 311 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 MCOLN3Q8TDD5 553 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 CFAP36Q96G28 342 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 OR2A5Q96R48 311 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 C17orf62Q9BQA9 187 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 SELENOSQ9BQE4 189 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 TACO1Q9BSH4 297 aaKnown RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 SLC25A23Q9BV35 468 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 ACSS2Q9NR19 701 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 FAM114A2Q9NRY5 505 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 TAS2R13Q9NYV9 303 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 NDOR1Q9UHB4 597 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 TAC3Q9UHF0 121 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 GPN3Q9UHW5 284 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 CHMP2BQ9UQN3 213 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.93□□□□□ -0.98
HDAC3-215ENST00000519474 FER1L5A0AVI2 2057 aa8.93□□□□□ -0.98
HDAC3-215ENST00000519474 SMG1Q96Q15 3661 aaKnown RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 A0A1B0GX78 115 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 A6NL46 340 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 VSTM2BA6NLU5 285 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 ZNF839A8K0R7 811 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 H7BY64 318 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 SLC16A5O15375 505 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 LCMT2O60294 686 aaKnown RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 TSPAN12O95859 305 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 EIF2S1P05198 315 aaKnown RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 PIM1P11309 404 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 OTX2P32243 289 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 FOLR3P41439 243 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 CSRP3P50461 194 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 ARL4CP56559 192 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 SNRPNP63162 240 aaKnown RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 ABATP80404 500 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 KLRB1Q12918 225 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 PDIA2Q13087 525 aaKnown RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 TSTA3Q13630 321 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 ATP1A4Q13733 1029 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 FRG1Q14331 258 aaKnown RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 FASTKD3Q14CZ7 662 aaKnown RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 NKG7Q16617 165 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 ZSCAN26Q16670 478 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 TSNAXIP1Q2TAA8 658 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 HECTD2Q5U5R9 776 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 TMEM207Q6UWW9 146 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 LAPTM4BQ86VI4 370 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 ARHGEF39Q8N4T4 335 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 TTC29Q8NA56 475 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 FBXO36Q8NEA4 188 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 SNF8Q96H20 258 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 PDLIM5Q96HC4 596 aaKnown RBP8.92□□□□□ -0.98
HDAC3-215ENST00000519474 CCDC138Q96M89 665 aa8.92□□□□□ -0.98
HDAC3-215ENST00000519474 PRAP1Q96NZ9 151 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms