RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 COL9A2Q14055 689 aaPredicted RBP13.38□□□□□ -0.27
USP46-209ENST00000514536 MAP7Q14244 749 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 NAA25Q14CX7 972 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 OR4D1Q15615 310 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 TAOK1Q7L7X3 1001 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 ADCK2Q7Z695 626 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 PAQR7Q86WK9 346 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 GPSM1Q86YR5 675 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 ZNF655Q8N720 491 aaPredicted RBP13.38□□□□□ -0.27
USP46-209ENST00000514536 KCTD4Q8WVF5 259 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 UBLCP1Q8WVY7 318 aaPredicted RBP13.38□□□□□ -0.27
USP46-209ENST00000514536 KIAA1191Q96A73 305 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 CLIP3Q96DZ5 547 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 CRELD1Q96HD1 420 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 PRAP1Q96NZ9 151 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 SLC7A5P2Q9GIP4 190 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 PCBD2Q9H0N5 130 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 VPS11Q9H270 941 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 ACTR5Q9H9F9 607 aaPredicted RBP13.38□□□□□ -0.27
USP46-209ENST00000514536 AKIRIN1Q9H9L7 192 aaPredicted RBP13.38□□□□□ -0.27
USP46-209ENST00000514536 CPNE5Q9HCH3 593 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 IGSF5Q9NSI5 407 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 CUEDC1Q9NWM3 386 aaPredicted RBP13.38□□□□□ -0.27
USP46-209ENST00000514536 ZNF180Q9UJW8 692 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 SH2B3Q9UQQ2 575 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 TFEBP19484 476 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 GCAP28676 217 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 ABHD18Q0P651 414 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 GPS2Q13227 327 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 TGFBIQ15582 683 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 ERCC6LQ2NKX8 1250 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 COL28A1Q2UY09 1125 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 C18orf21Q32NC0 220 aaPredicted RBP13.37□□□□□ -0.27
USP46-209ENST00000514536 PTCHD3Q3KNS1 767 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 TAF1BQ53T94 588 aaPredicted RBP13.37□□□□□ -0.27
USP46-209ENST00000514536 ZNF425Q6IV72 752 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 TLDC1Q6P9B6 456 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 FAM199XQ6PEV8 388 aaPredicted RBP13.37□□□□□ -0.27
USP46-209ENST00000514536 LCTLQ6UWM7 567 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 CCDC81Q6ZN84 652 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 ISCA2Q86U28 154 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 C17orf64Q86WR6 236 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 SELENOSQ9BQE4 189 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 CCDC77Q9BR77 488 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 DHRS4Q9BTZ2 278 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 ALG9Q9H6U8 611 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 LHX9Q9NQ69 397 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 STARD5Q9NSY2 213 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 ANKMY1Q9P2S6 941 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 RNF112Q9ULX5 631 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 AP1M2Q9Y6Q5 423 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 NBEAQ8NFP9 2946 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 ADAMTS20P59510 1910 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 LOC105369274A0A096LPK9 316 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 LOC102723532A0A0G2JNH3 316 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 TRIM49D1C9J1S8 452 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 ZSCAN9O15535 394 aaPredicted RBP13.37□□□□□ -0.27
USP46-209ENST00000514536 SRPX2O60687 465 aaPredicted RBP13.37□□□□□ -0.27
USP46-209ENST00000514536 KLK3P07288 261 aaPredicted RBP13.37□□□□□ -0.27
USP46-209ENST00000514536 SNRPAP09012 282 aaKnown RBP13.37□□□□□ -0.27
USP46-209ENST00000514536 LIFP15018 202 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 CNTFP26441 200 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 UCNP55089 124 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 VSX2P58304 361 aaPredicted RBP13.37□□□□□ -0.27
USP46-209ENST00000514536 CXADRP78310 365 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 WASHC2DQ5SRD0 308 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 LGSNQ5TDP6 509 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 FRMPD2BQ6IN97 320 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 ADGRD1Q6QNK2 874 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 CCDC91Q7Z6B0 441 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 PLD3Q8IV08 490 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 CENPLQ8N0S6 344 aaPredicted RBP13.37□□□□□ -0.27
USP46-209ENST00000514536 OR4N4Q8N0Y3 316 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 STAG3L4Q8TBR4 150 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 EXT2Q93063 718 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 MR1Q95460 341 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 KIAA1143Q96AT1 154 aaPredicted RBP13.37□□□□□ -0.27
USP46-209ENST00000514536 RHBDF1Q96CC6 855 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 OR4K3Q96R72 315 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 ZFYVE21Q9BQ24 234 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 HAUS8Q9BT25 410 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 GPN2Q9H9Y4 310 aaPredicted RBP13.37□□□□□ -0.27
USP46-209ENST00000514536 TMEM184CQ9NVA4 438 aa13.37□□□□□ -0.27
USP46-209ENST00000514536 MEN1O00255 615 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 HAT1O14929 419 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 KLHL2O95198 593 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 EIF2S1P05198 315 aaKnown RBP13.36□□□□□ -0.27
USP46-209ENST00000514536 HBQ1P09105 142 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 CDH1P12830 882 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 WT1P19544 449 aaPredicted RBP13.36□□□□□ -0.27
USP46-209ENST00000514536 TCN2P20062 427 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 HRH2P25021 359 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 STAT5AP42229 794 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 GDF5P43026 501 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 GLRBP48167 497 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 HNMTP50135 292 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 TMPRSS3P57727 454 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 FAM83EQ2M2I3 478 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 TCTE1Q5JU00 501 aa13.36□□□□□ -0.27
USP46-209ENST00000514536 LCN10Q6JVE6 187 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms