RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 KBTBD12Q3ZCT8 623 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 BORAQ6PGQ7 559 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 AGTRAPQ6RW13 159 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 MBOAT1Q6ZNC8 495 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 APLFQ8IW19 511 aaPredicted RBP9.29□□□□□ -0.92
RNF4-221ENST00000513643 KLHDC8AQ8IYD2 350 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 GPR135Q8IZ08 494 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 MYO1HQ8N1T3 1032 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 ZNF843Q8N446 348 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 NKAPQ8N5F7 415 aaKnown RBP9.29□□□□□ -0.92
RNF4-221ENST00000513643 ZNF655Q8N720 491 aaPredicted RBP9.29□□□□□ -0.92
RNF4-221ENST00000513643 PPFIBP2Q8ND30 876 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 MNS1Q8NEH6 495 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 ABHD11Q8NFV4 315 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 OR4K1Q8NGD4 311 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 KIF18AQ8NI77 898 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 MR1Q95460 341 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 FBXL8Q96CD0 374 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 CLIP3Q96DZ5 547 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 OR4K3Q96R72 315 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 RBBP8Q99708 897 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 ZFYVE21Q9BQ24 234 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 DHRS4Q9BTZ2 278 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 PCBD2Q9H0N5 130 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 SLC26A1Q9H2B4 701 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 ADNPQ9H2P0 1102 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 MRPS30Q9NP92 439 aaKnown RBP9.29□□□□□ -0.92
RNF4-221ENST00000513643 STARD5Q9NSY2 213 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 DHCR7Q9UBM7 475 aaKnown RBP9.29□□□□□ -0.92
RNF4-221ENST00000513643 TAC3Q9UHF0 121 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 TCFL5Q9UL49 500 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 SNX7Q9UNH6 387 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 KCNMB2Q9Y691 235 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 MED13Q9UHV7 2174 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 IGLV3-12A0A075B6K2 115 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 CTAGE15A4D2H0 777 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 VSTM2BA6NLU5 285 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 H0YGG7 62 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 DSCR3O14972 297 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 CCNDBP1O95273 360 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 ALBP02768 609 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 CTAGE8P0CG41 777 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 EZRP15311 586 aaKnown RBP9.28□□□□□ -0.92
RNF4-221ENST00000513643 CCND1P24385 295 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 RPA3P35244 121 aaPredicted RBP9.28□□□□□ -0.92
RNF4-221ENST00000513643 ARF3P61204 181 aaPredicted RBP9.28□□□□□ -0.92
RNF4-221ENST00000513643 RPS18P62269 152 aaKnown RBP9.28□□□□□ -0.92
RNF4-221ENST00000513643 TBPL1P62380 186 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 RPS15P62841 145 aaKnown RBP9.28□□□□□ -0.92
RNF4-221ENST00000513643 CSNK1G2P78368 415 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 NAB1Q13506 487 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 LY6DQ14210 128 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 ERV3-1Q14264 604 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 ZNF460Q14592 562 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 GRM7Q14831 915 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 FAM214AQ32MH5 1076 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 NKAIN1Q4KMZ8 207 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 WASHC2DQ5SRD0 308 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 UBAP2Q5T6F2 1119 aaKnown RBP9.28□□□□□ -0.92
RNF4-221ENST00000513643 GRTP1Q5TC63 336 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 LCTLQ6UWM7 567 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 COX15Q7KZN9 410 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 OVCH1Q7RTY7 1134 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 CTAGE6Q86UF2 777 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 TMEM151BQ8IW70 566 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 CTAGE4Q8IX94 777 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 ENDOVQ8N8Q3 282 aaKnown RBP9.28□□□□□ -0.92
RNF4-221ENST00000513643 FBF1Q8TES7 1133 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 APOBEC4Q8WW27 367 aaKnown RBP9.28□□□□□ -0.92
RNF4-221ENST00000513643 THAP4Q8WY91 577 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 CDKL2Q92772 493 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 NACC2Q96BF6 587 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 TM4SF19Q96DZ7 209 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 C10orf90Q96M02 699 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 C17orf62Q9BQA9 187 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 SELENOSQ9BQE4 189 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 ACAT2Q9BWD1 397 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 DERL2Q9GZP9 239 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 MLXIPLQ9NP71 852 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 CUTCQ9NTM9 273 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 TMEM184CQ9NVA4 438 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 CUEDC1Q9NWM3 386 aaPredicted RBP9.28□□□□□ -0.92
RNF4-221ENST00000513643 SH2B3Q9UQQ2 575 aa9.28□□□□□ -0.92
RNF4-221ENST00000513643 A0A0J9YVX5 310 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 A0A1B0GX78 115 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 HYKKA2RU49 373 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 H7BY64 318 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 CDC7O00311 574 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 HAT1O14929 419 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 FOXS1O43638 330 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 KATNA1O75449 491 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 CEACAM4O75871 244 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 FAM155BO75949 473 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 SYF2O95926 243 aaKnown RBP9.27□□□□□ -0.93
RNF4-221ENST00000513643 PRB1P04280 392 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 UMODP07911 640 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 CD63P08962 238 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 FAM87AP0C7U9 286 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 PRKAR1AP10644 381 aa9.27□□□□□ -0.93
RNF4-221ENST00000513643 SFTPCP11686 197 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms