RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SYTL1Q8IYJ3 562 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 TBC1D3Q8IZP1 549 aaPredicted RBP8.09□□□□□ -1.11
RNF4-220ENST00000513578 ZNF687Q8N1G0 1237 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 LIX1Q8N485 282 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 RAB42Q8N4Z0 105 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 OR7G3Q8NG95 312 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 OR8J3Q8NGG0 315 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 RPLP0P6Q8NHW5 317 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 SLC26A7Q8TE54 656 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 SLC5A11Q8WWX8 675 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 NEIL2Q969S2 332 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 CCDC124Q96CT7 223 aaKnown RBP8.09□□□□□ -1.11
RNF4-220ENST00000513578 MED8Q96G25 268 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 TMEM74Q96NL1 305 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 HBEGFQ99075 208 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 RAB11FIP5Q9BXF6 653 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 MVB12BQ9H7P6 319 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 CMTM6Q9NX76 183 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 C6orf203Q9P0P8 240 aaPredicted RBP8.09□□□□□ -1.11
RNF4-220ENST00000513578 USP36Q9P275 1121 aaKnown RBP8.09□□□□□ -1.11
RNF4-220ENST00000513578 FAM8A1Q9UBU6 413 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 PCOLCE2Q9UKZ9 415 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 ASF1AQ9Y294 204 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 OR1A2Q9Y585 309 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 EYSQ5T1H1 3165 aa8.09□□□□□ -1.11
RNF4-220ENST00000513578 TRBV5-3A0A0A0MS03 114 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 PRSS51A0A1B0GVH4 220 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 KRT87PA6NCN2 255 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 PEX1O43933 1283 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 KDM1AO60341 852 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 ERN1O75460 977 aaKnown RBP8.08□□□□□ -1.12
RNF4-220ENST00000513578 MYO1DO94832 1006 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 KCNH1O95259 989 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 STAMBPO95630 424 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 GABRG2P18507 467 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 SDC1P18827 310 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 PRPS1L1P21108 318 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 HNRNPA2B1P22626 353 aaKnown RBP8.08□□□□□ -1.12
RNF4-220ENST00000513578 CXCR2P25025 360 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 HTR1EP28566 365 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 ASMTP46597 345 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 TPMTP51580 245 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 NEK2P51955 445 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 DGKEP52429 567 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 PPP2CBP62714 309 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 PPP2CAP67775 309 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 PHEXP78562 749 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 PRKCQQ04759 706 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 SRSF11Q05519 484 aaKnown RBP8.08□□□□□ -1.12
RNF4-220ENST00000513578 PTGR1Q14914 329 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 UAP1L1Q3KQV9 507 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 PUS10Q3MIT2 529 aaKnown RBP8.08□□□□□ -1.12
RNF4-220ENST00000513578 PLA2G4EQ3MJ16 856 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 LEXMQ3ZCV2 418 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 TIGD2Q4W5G0 525 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 SPIN4Q56A73 249 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 SGO1Q5FBB7 561 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 C6orf10Q5SRN2 563 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 PRAMEF14Q5SWL7 426 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 LRIF1Q5T3J3 769 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 PRAMEF13Q5VWM6 474 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 NANOGP8Q6NSW7 305 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 NOXRED1Q6NXP6 359 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 ABRAXAS1Q6UWZ7 409 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 LAYNQ6UX15 382 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 RNF111Q6ZNA4 994 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 SYT13Q7L8C5 426 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 CAMKMTQ7Z624 323 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 DHDDSQ86SQ9 333 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 FAM129CQ86XR2 697 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 CACUL1Q86Y37 369 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 KIAA2013Q8IYS2 634 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 EFCAB3Q8N7B9 438 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 PPFIBP2Q8ND30 876 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 ABHD11Q8NFV4 315 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 OR4K1Q8NGD4 311 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 OR5AR1Q8NGP9 310 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 FAM174AQ8TBP5 190 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 CHTF18Q8WVB6 975 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 NRG4Q8WWG1 115 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 SLC13A3Q8WWT9 602 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 SMPDL3AQ92484 453 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 GTF2H4Q92759 462 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 VPS33AQ96AX1 596 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 MTFMTQ96DP5 389 aaKnown RBP8.08□□□□□ -1.12
RNF4-220ENST00000513578 APIPQ96GX9 242 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 INSM2Q96T92 566 aaPredicted RBP8.08□□□□□ -1.12
RNF4-220ENST00000513578 SH3GL1Q99961 368 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 OSBPL6Q9BZF3 934 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 TRIM15Q9C019 465 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 TWSG1Q9GZX9 223 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 SLC6A17Q9H1V8 727 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 KCNH6Q9H252 994 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 RHBGQ9H310 441 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 VCX3BQ9H321 246 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 NANOGQ9H9S0 305 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 POLMQ9NP87 494 aaPredicted RBP8.08□□□□□ -1.12
RNF4-220ENST00000513578 GEMIN8Q9NWZ8 242 aaKnown RBP8.08□□□□□ -1.12
RNF4-220ENST00000513578 ACTR3BQ9P1U1 418 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 DMTF1Q9Y222 760 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms