RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 CCDC71Q8IV32 467 aaPredicted RBP9.93□□□□□ -0.82
CLDND1-227ENST00000513452 DCUN1D3Q8IWE4 304 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 ZC3H7AQ8IWR0 971 aaKnown RBP9.93□□□□□ -0.82
CLDND1-227ENST00000513452 CFAP61Q8NHU2 1237 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 CTNNBL1Q8WYA6 563 aaPredicted RBP9.93□□□□□ -0.82
CLDND1-227ENST00000513452 HAUS1Q96CS2 278 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 MMABQ96EY8 250 aaPredicted RBP9.93□□□□□ -0.82
CLDND1-227ENST00000513452 RMND5BQ96G75 393 aaPredicted RBP9.93□□□□□ -0.82
CLDND1-227ENST00000513452 QKIQ96PU8 341 aaKnown RBP eCLIP9.93□□□□□ -0.823e-7■■□□□ 11.5
CLDND1-227ENST00000513452 ALPK1Q96QP1 1244 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 VAT1Q99536 393 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 MIPEPQ99797 713 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 PACSIN1Q9BY11 444 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 KCNK13Q9HB14 408 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 MKKSQ9NPJ1 570 aaPredicted RBP9.93□□□□□ -0.82
CLDND1-227ENST00000513452 ZNF358Q9NW07 568 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 ANO10Q9NW15 660 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 LRFN1Q9P244 771 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 LCMT1Q9UIC8 334 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 SLC39A10Q9ULF5 831 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 CDC14AQ9UNH5 594 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 HCFC1P51610 2035 aa9.93□□□□□ -0.82
CLDND1-227ENST00000513452 FN1P02751 2386 aaKnown RBP9.93□□□□□ -0.82
CLDND1-227ENST00000513452 CSPG4Q6UVK1 2322 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 GABRR3A8MPY1 467 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 TARM1B6A8C7 271 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 QSOX1O00391 747 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 PROM1O43490 865 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 CST8O60676 142 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 CTAG2O75638 210 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 RPN2P04844 631 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 SERPING1P05155 500 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 SP1P08047 785 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 TNNT1P13805 278 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 ADSLP30566 484 aaPredicted RBP9.92□□□□□ -0.82
CLDND1-227ENST00000513452 PTGS2P35354 604 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 DGKQP52824 942 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 PLOD1Q02809 727 aaPredicted RBP9.92□□□□□ -0.82
CLDND1-227ENST00000513452 MSLNQ13421 630 aaPredicted RBP9.92□□□□□ -0.82
CLDND1-227ENST00000513452 GRB7Q14451 532 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 STX1AQ16623 288 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 MAPKAPK3Q16644 382 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 MEP1AQ16819 746 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 PRTGQ2VWP7 1150 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 FILIP1LQ4L180 1135 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 PLAG1Q6DJT9 500 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 TMEM211Q6ICI0 200 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 MFSD7Q6UXD7 560 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 CLEC9AQ6UXN8 241 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 VRK3Q8IV63 474 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 SLC22A15Q8IZD6 547 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 CLYBLQ8N0X4 340 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 RPRMLQ8N4K4 120 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 CPSF7Q8N684 471 aaKnown RBP9.92□□□□□ -0.82
CLDND1-227ENST00000513452 WFDC11Q8NEX6 87 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 FAM57AQ8TBR7 257 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 METTL21AQ8WXB1 218 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 RND1Q92730 232 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 ZUFSPQ96AP4 578 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 PWWP2AQ96N64 755 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 NPAS2Q99743 824 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 GPATCH1Q9BRR8 931 aaKnown RBP9.92□□□□□ -0.82
CLDND1-227ENST00000513452 TGIF2Q9GZN2 237 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 CLEC4MQ9H2X3 399 aaPredicted RBP9.92□□□□□ -0.82
CLDND1-227ENST00000513452 SLC24A3Q9HC58 644 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 CHMP5Q9NZZ3 219 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 TRHDEQ9UKU6 1024 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 HRH3Q9Y5N1 445 aa9.92□□□□□ -0.82
CLDND1-227ENST00000513452 A0A1B0GTH9 108 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 KRT87PA6NCN2 255 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 CDC40O60508 579 aaKnown RBP eCLIP9.91□□□□□ -0.82
CLDND1-227ENST00000513452 SLC25A12O75746 678 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 NEURL1O76050 574 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 SUN1O94901 812 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 FKBP9O95302 570 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 H2AFZP0C0S5 128 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 PSMB4P28070 264 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 SLC26A3P40879 764 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 CDKN2BP42772 138 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 MAT1AQ00266 395 aaKnown RBP9.91□□□□□ -0.82
CLDND1-227ENST00000513452 TYRO3Q06418 890 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 HSPA14Q0VDF9 509 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 TFDP2Q14188 446 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 HKDC1Q2TB90 917 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 MFSD4BQ5TF39 518 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 SLC25A25Q6KCM7 469 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 H3F3CQ6NXT2 135 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 SASS6Q6UVJ0 657 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 PACS1Q6VY07 963 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 H2AFVQ71UI9 128 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 CPEB2Q7Z5Q1 589 aaKnown RBP9.91□□□□□ -0.82
CLDND1-227ENST00000513452 ZZZ3Q8IYH5 903 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 HORMAD2Q8N7B1 307 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 LRRN4CLQ8ND94 238 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 OR2L3Q8NG85 312 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 NUDT8Q8WV74 236 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 P3H4Q92791 437 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 MVB12AQ96EY5 273 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 SEC16BQ96JE7 1060 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 C18orf12Q96KH6 178 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms