RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 RPP38P78345 283 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MRPS22P82650 360 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 XIAPP98170 497 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HSF1Q00613 529 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MESP2Q0VG99 397 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ELAVL2Q12926 359 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRAP1Q12931 704 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 C1DQ13901 141 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 IKBKEQ14164 716 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TAF13Q15543 124 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ALFQ53S48 1182 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCNX4Q63HM2 1172 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TCEAL6Q6IPX3 200 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDC73Q6P1J9 531 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 WASH2PQ6VEQ5 465 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PLPPR4Q7Z2D5 763 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SNX20Q7Z614 316 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PXKQ7Z7A4 578 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATP6V0D2Q8N8Y2 350 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PNLDC1Q8NA58 520 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 POC5Q8NA72 575 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RDM1Q8NG50 284 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLHC1Q8NHS4 586 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPTC7Q8NI37 304 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RDH11Q8TC12 318 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ASB12Q8WXK4 309 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SEPT1Q8WYJ6 367 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HDAC10Q969S8 669 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MTERF3Q96E29 417 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 APOPT1Q96IL0 206 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GLT1D1Q96MS3 346 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERPINB12Q96P63 405 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PHB2Q99623 299 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRTAP4-12Q9BQ66 201 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 DPH2Q9BQC3 489 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CHCHD6Q9BRQ6 235 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMPRSS13Q9BYE2 586 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GABARAPL1Q9H0R8 117 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM168Q9H0V1 697 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RERGLQ9H628 205 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPN2Q9H9Y4 310 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAVER2Q9HCJ3 691 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM74BQ9NUR3 256 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FBXO28Q9NVF7 368 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 IMPAD1Q9NX62 359 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 DTLQ9NZJ0 730 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZMIZ1Q9ULJ6 1067 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHA12Q9UN75 941 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GTF2A1LQ9UNN4 478 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GIT1Q9Y2X7 761 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 A0A1W2PRG6 482 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 UBE2QL1A1L167 161 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR6C65A6NJZ3 312 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 KBTBD13C9JR72 458 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 QSOX1O00391 747 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRIT1O00522 736 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 DNALI1O14645 258 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HNRNPDLO14979 420 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 LDB2O43679 373 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 NRP2O60462 931 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GATBO75879 557 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MPC2O95563 127 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERPINA1P01009 418 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 LDLRP01130 860 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ENO2P09104 434 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ERGP11308 486 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRKAR2AP13861 404 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MYL6BP14649 208 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRKCAP17252 672 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPC1P35052 558 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MSX2P35548 267 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FDFT1P37268 417 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PIK3CGP48736 1102 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 STARP49675 285 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RGS6P49758 472 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GUCY2FP51841 1108 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GTF2A1P52655 376 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HMGA2P52926 109 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAD23AP54725 363 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARPP19P56211 112 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 LINC00310P59036 64 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GMFBP60983 142 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CAV1Q03135 178 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SRSF4Q08170 494 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPEM2Q0P670 501 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 DBPQ10586 325 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HTR4Q13639 388 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 RCAN2Q14206 197 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MLC1Q15049 377 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 MPPED2Q15777 294 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SNAPC1Q16533 368 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 HSDL1Q3SXM5 330 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 AASDHQ4L235 1098 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 SYTL3Q4VX76 610 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 GJC2Q5T442 439 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM154Q6P9G4 183 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 LCTLQ6UWM7 567 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC190Q86UF4 302 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 COMMD2Q86X83 199 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDZD9Q8IXQ8 264 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms