RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 BMPR2Q13873 1038 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 SLC29A2Q14542 456 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 TGFBIQ15582 683 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 PPP1R3AQ16821 1122 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 COL28A1Q2UY09 1125 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 DEFB110Q30KQ9 67 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 TAF1BQ53T94 588 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 TCTE1Q5JU00 501 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 CDKL4Q5MAI5 379 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 LGSNQ5TDP6 509 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 PRAMEF17Q5VTA0 474 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 ZNF425Q6IV72 752 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 FBXO42Q6P3S6 717 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 INO80CQ6PI98 192 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 CMC1Q7Z7K0 106 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 VASH2Q86V25 355 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 C17orf64Q86WR6 236 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 GPSM1Q86YR5 675 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 CNPY4Q8N129 248 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 GOLGA6L1Q8N7Z2 621 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 ZSCAN1Q8NBB4 408 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 SLC38A9Q8NBW4 561 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 OR56A3Q8NH54 315 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 STAG3L4Q8TBR4 150 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 KIAA1191Q96A73 305 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 ALKBH8Q96BT7 664 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 RNF31Q96EP0 1072 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 EGFL8Q99944 293 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 ZFYVE21Q9BQ24 234 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 SELENOSQ9BQE4 189 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 CCDC77Q9BR77 488 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 HAUS8Q9BT25 410 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 SGPP1Q9BX95 441 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 SPRTNQ9H040 489 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 ACTR5Q9H9F9 607 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 GPN2Q9H9Y4 310 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 NMRAL1Q9HBL8 299 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 CPNE5Q9HCH3 593 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 SLC6A20Q9NP91 592 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 LHX9Q9NQ69 397 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 SNX15Q9NRS6 342 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 TMEM184CQ9NVA4 438 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 KCND3Q9UK17 655 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 CROTQ9UKG9 612 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 ACOT9Q9Y305 439 aa6.86□□□□□ -1.31
PDLIM5-215ENST00000511586 CELSR3Q9NYQ7 3312 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 A0A096LPK6 155 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 A0A0J9YVX5 310 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 EXOC1LA0A1B0GW35 172 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 CCDC189A1A4V9 331 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 FITM1A5D6W6 292 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 C21orf140B9A014 251 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 H7BY64 318 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 KRT37O76014 449 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 KRT38O76015 456 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 CTSBP07858 339 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 SNRPAP09012 282 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 LIFP15018 202 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 EZRP15311 586 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 CD1DP15813 335 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 TFEBP19484 476 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 AGXTP21549 392 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 RORAP35398 523 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 DLSTP36957 453 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 CSRP3P50461 194 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 ARSFP54793 590 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 VSX2P58304 361 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 CXADRP78310 365 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 DLG1Q12959 904 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 SRSF6Q13247 344 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 GRM7Q14831 915 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 OR4D1Q15615 310 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 FAM83EQ2M2I3 478 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 ZXDCQ2QGD7 858 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 FAM214AQ32MH5 1076 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 PTCHD3Q3KNS1 767 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 ARHGAP40Q5TG30 622 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 YOD1Q5VVQ6 348 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 SULT1C3Q6IMI6 304 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 RHBDD2Q6NTF9 364 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 KLC3Q6P597 504 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 LCTLQ6UWM7 567 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 ZNF517Q6ZMY9 492 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 RNF44Q7L0R7 432 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 GPR155Q7Z3F1 870 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 ADCK2Q7Z695 626 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 ISCA2Q86U28 154 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 THOC6Q86W42 341 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 PAQR7Q86WK9 346 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 DSELQ8IZU8 1212 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 TCAIMQ8N3R3 496 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 MREGQ8N565 214 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 ZNF655Q8N720 491 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 DCAKDQ8WVC6 231 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 KCTD4Q8WVF5 259 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 SNRNP27Q8WVK2 155 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 UBLCP1Q8WVY7 318 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 MR1Q95460 341 aa6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 RERGQ96A58 199 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-215ENST00000511586 PTERQ96BW5 349 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms