RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 OCIAD1Q9NX40 245 aa5.28□□□□□ -1.56
GYPB-212ENST00000511198 DDX43Q9NXZ2 648 aaKnown RBP5.28□□□□□ -1.56
GYPB-212ENST00000511198 VPS18Q9P253 973 aa5.28□□□□□ -1.56
GYPB-212ENST00000511198 NAALADL1Q9UQQ1 740 aa5.28□□□□□ -1.56
GYPB-212ENST00000511198 WNK1Q9H4A3 2382 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 TRBV5-3A0A0A0MS03 114 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 SPTY2D1-AS1A0A0U1RR47 76 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 CTAGE15A4D2H0 777 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 CTAGE9A4FU28 777 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 TTC34A8MYJ7 566 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 B4DGG1 531 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 LMO7DNF2Z398 122 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 H3BNX3 289 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 CPLX1O14810 134 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 PHF1O43189 567 aaPredicted RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 CEACAM4O75871 244 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 CRYABP02511 175 aaKnown RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 KLKB1P03952 638 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 CTAGE8P0CG41 777 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 HOXB6P17509 224 aaKnown RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 RYR1P21817 5038 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 HLA-FP30511 346 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 USP8P40818 1118 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 AGTR2P50052 363 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 CHD3Q12873 2000 aaKnown RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 CHRNA6Q15825 494 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 KRTAP24-1Q3LI83 254 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 TUBB8Q3ZCM7 444 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 SETMARQ53H47 684 aaPredicted RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 C9orf64Q5T6V5 341 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 SNX30Q5VWJ9 437 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 NCAPH2Q6IBW4 605 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 HIBCHQ6NVY1 386 aaPredicted RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 CRELD2Q6UXH1 353 aaPredicted RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 MEX3BQ6ZN04 569 aaKnown RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 CTAGE6Q86UF2 777 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 CTAGE4Q8IX94 777 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 MB21D2Q8IYB1 491 aaPredicted RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 ZNF713Q8N859 430 aaPredicted RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 NCOA7Q8NI08 942 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 WASF1Q92558 559 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 MSI2Q96DH6 328 aaKnown RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 RTP4Q96DX8 246 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 CEP295NLQ96MC4 621 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 NAPGQ99747 312 aaPredicted RBP5.27□□□□□ -1.57
GYPB-212ENST00000511198 NUDT22Q9BRQ3 303 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 TWSG1Q9GZX9 223 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 FAM234AQ9H0X4 552 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 CDCP1Q9H5V8 836 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 ANKZF1Q9H8Y5 726 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 RDH14Q9HBH5 336 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 PDE11AQ9HCR9 933 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 FGF21Q9NSA1 209 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 SLC39A1Q9NY26 324 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 RPS6KL1Q9Y6S9 549 aa5.27□□□□□ -1.57
GYPB-212ENST00000511198 CNTRLQ7Z7A1 2325 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 CACNA1CQ13936 2221 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 A0A087WUV0 522 aaPredicted RBP5.26□□□□□ -1.57
GYPB-212ENST00000511198 IGHV5-10-1A0A0J9YXX1 117 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 KLF18A0A0U1RQI7 1052 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 KPNA7A9QM74 516 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 EIF3CLB5ME19 914 aaKnown RBP5.26□□□□□ -1.57
GYPB-212ENST00000511198 F8VP50 259 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 B4GAT1O43505 415 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 PLRG1O43660 514 aaKnown RBP5.26□□□□□ -1.57
GYPB-212ENST00000511198 PRC1O43663 620 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 RNASEH1O60930 286 aaKnown RBP5.26□□□□□ -1.57
GYPB-212ENST00000511198 ALPLP05186 524 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 ADRB2P07550 413 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 ZDHHC11BP0C7U3 371 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 CCKARP32238 428 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 DLSTP36957 453 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 STAT1P42224 750 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 STAT6P42226 847 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 PSMD8P48556 350 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 TAF6P49848 677 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 ADORA2A-AS1P86434 159 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 CKAP4Q07065 602 aaKnown RBP5.26□□□□□ -1.57
GYPB-212ENST00000511198 TRIM29Q14134 588 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 CASP8Q14790 479 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 POSTNQ15063 836 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 FILIP1LQ4L180 1135 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 DCAF12Q5T6F0 453 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 JADE1Q6IE81 842 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 PODNL1Q6PEZ8 512 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 GBP6Q6ZN66 633 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 SFR1Q86XK3 245 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 UEVLDQ8IX04 471 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 LAS2Q8IYD9 372 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 ARL10Q8N8L6 244 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 BMPERQ8N8U9 685 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 MCPH1Q8NEM0 835 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 FDCSPQ8NFU4 85 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 GLMPQ8WWB7 406 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 MYLPFQ96A32 169 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 C8orf48Q96LL4 319 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 MYCBPQ99417 103 aaPredicted RBP5.26□□□□□ -1.57
GYPB-212ENST00000511198 EIF3CQ99613 913 aaKnown RBP5.26□□□□□ -1.57
GYPB-212ENST00000511198 CTRCQ99895 268 aa5.26□□□□□ -1.57
GYPB-212ENST00000511198 NCAPGQ9BPX3 1015 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms