RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MKRN2Q9H000 416 aaKnown RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 MKKSQ9NPJ1 570 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 GLTPQ9NZD2 209 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 C2CD4BA6NLJ0 364 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 ADAM10O14672 748 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 EPOP01588 193 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 HTR1EP28566 365 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 SIM2Q14190 667 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 TGFBIQ15582 683 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 IL17AQ16552 155 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 TMEM39BQ9GZU3 492 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 SPIN1Q9Y657 262 aaPredicted RBP8.18□□□□□ -1.1
HTT-208ENST00000510626 ABHD14A-ACY1A0A1B0GW23 586 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 AP1G1O43747 822 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 OR1I1O60431 355 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 NDUFAF5Q5TEU4 345 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 HMBOX1Q6NT76 420 aa8.18□□□□□ -1.1
HTT-208ENST00000510626 TTLL8A6PVC2 850 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 SYN3O14994 580 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 POP4O95707 220 aaKnown RBP8.17□□□□□ -1.1
HTT-208ENST00000510626 PDYNP01213 254 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 ALPPP05187 535 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 FUT2Q10981 343 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 AKT1S1Q96B36 256 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 H0Y858 1186 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 ADH1CP00326 375 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 COL6A1P12109 1028 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 ENTPD1P49961 510 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 ACTC1P68032 377 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 ACTA1P68133 377 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 CDKL1Q00532 357 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 EMX2Q04743 252 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 HSDL1Q3SXM5 330 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 RAD51AP1Q96B01 352 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 PELOQ9BRX2 385 aaKnown RBP8.17□□□□□ -1.1
HTT-208ENST00000510626 DERL2Q9GZP9 239 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 HACL1Q9UJ83 578 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 A0A0G2JLW4 131 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 NPIPA7E9PJI5 369 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 OR2B3O76000 313 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 CTSHP09668 335 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 NPIPA8P0DM63 369 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 ALDH3B2P48448 385 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 FAPQ12884 760 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 SNTA1Q13424 505 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 TAF1CQ15572 869 aaPredicted RBP8.17□□□□□ -1.1
HTT-208ENST00000510626 TSTD2Q5T7W7 516 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 CMC1Q7Z7K0 106 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 PAQR7Q86WK9 346 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 DLDP09622 509 aaKnown RBP8.17□□□□□ -1.1
HTT-208ENST00000510626 PPM1AP35813 382 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 CCR8P51685 355 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 RPA4Q13156 261 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 AADACL2Q6P093 401 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 A6NHS1 94 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 NUDT7P0C024 238 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 MOGSQ13724 837 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 RAB39AQ14964 217 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 HES5Q5TA89 166 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 OR4C15Q8NGM1 316 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 RPLP0P6Q8NHW5 317 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 TEX264Q9Y6I9 313 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 TEX13CA0A0J9YWL9 993 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 BANF1O75531 89 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 IFNA10P01566 189 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 IFNA4P05014 189 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 CSN2P05814 226 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 SLC9B1Q4ZJI4 515 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 SLX4IPQ5VYV7 408 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 RTL6Q6ICC9 239 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 FAM122CQ6P4D5 195 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 OR13J1Q8NGT2 312 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 SLC35B2Q8TB61 432 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 IFT172Q9UG01 1749 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 PTPRZ1P23471 2315 aaPredicted RBP8.17□□□□□ -1.1
HTT-208ENST00000510626 INMT-MINDY4F8WBC2 141 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 ANXA4P09525 319 aaPredicted RBP8.17□□□□□ -1.1
HTT-208ENST00000510626 BDNFP23560 247 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 PRKCDQ05655 676 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 GPR153Q6NV75 609 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 ZDHHC24Q6UX98 284 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 CXorf40BQ96DE9 158 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 TSNAXQ99598 290 aaKnown RBP8.17□□□□□ -1.1
HTT-208ENST00000510626 U3KQV3 271 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 HNRNPDQ14103 355 aaKnown RBP8.17□□□□□ -1.1
HTT-208ENST00000510626 REEP3Q6NUK4 255 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 PRSS48Q7RTY5 328 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 PPTC7Q8NI37 304 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 DPYSL5Q9BPU6 564 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 SYT4Q9H2B2 425 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 RBM7Q9Y580 266 aaKnown RBP8.17□□□□□ -1.1
HTT-208ENST00000510626 MROH1Q8NDA8 1641 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 ZNF208O43345 1280 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 SPATA31C1P0DKV0 1188 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 MPIP34949 423 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 GALK2Q01415 458 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 CERCAMQ5T4B2 595 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 Q8N402 240 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 MINDY1Q8N5J2 469 aa8.17□□□□□ -1.1
HTT-208ENST00000510626 EID2Q8N6I1 236 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms