RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 TAS2R13Q9NYV9 303 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 GPN3Q9UHW5 284 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 TRMT6Q9UJA5 497 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 POLHQ9Y253 713 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 FARSAQ9Y285 508 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 MAN2B2Q9Y2E5 1009 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 KLHL20Q9Y2M5 609 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 A0A1W2PPM1 405 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 TRIM49D1C9J1S8 452 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 C9J4A7 227 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 RASGRF2O14827 1237 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 SLC16A8O95907 504 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 C2P06681 752 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 PLA2G2AP14555 144 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 PTPN4P29074 926 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 SLCO1A2P46721 670 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 GABRA4P48169 554 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 RPS18P62269 152 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 NFKB2Q00653 900 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 POU4F1Q01851 419 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 PDAP1Q13442 181 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 NAB1Q13506 487 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 USP10Q14694 798 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 TSNQ15631 228 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 SLC5A12Q1EHB4 618 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 PTCHD3Q3KNS1 767 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 TTLL9Q3SXZ7 439 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 FBXO48Q5FWF7 155 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 C1orf189Q5VU69 101 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 PTRH1Q86Y79 214 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 SYTL1Q8IYJ3 562 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 MREGQ8N565 214 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 SLC38A9Q8NBW4 561 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 OR2L8Q8NGY9 312 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 C9orf43Q8TAL5 461 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 ZNF480Q8WV37 535 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 KCTD4Q8WVF5 259 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 UBLCP1Q8WVY7 318 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 NXNL1Q96CM4 212 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 PDLIM5Q96HC4 596 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 RUFY1Q96T51 708 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 SPRTNQ9H040 489 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 C12orf65Q9H3J6 166 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 AKIRIN1Q9H9L7 192 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 FAM60AQ9NP50 221 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 ZNF71Q9NQZ8 489 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 TXLNGQ9NUQ3 528 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 NSMCE4AQ9NXX6 385 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 ZNF180Q9UJW8 692 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 SNX7Q9UNH6 387 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 AP1M2Q9Y6Q5 423 aa8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 SPENQ96T58 3664 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-213ENST00000509357 PCSK5Q92824 1860 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 EXOC1LA0A1B0GW35 172 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 H3BMH7 237 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 MKRN2OSH3BPM6 223 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 J3QKU1 62 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 TERTO14746 1132 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 TAPBPO15533 448 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 ZSCAN9O15535 394 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 PRAMEF4O60810 478 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 SYF2O95926 243 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 NUDT17P0C025 328 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 MSL3P1P0C860 447 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 CCDC166P0CW27 439 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 CBSLP0DN79 551 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 MTHFD2P13995 350 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 CREB1P16220 341 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 MAGP20916 626 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 ALAS2P22557 587 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 SPRP35270 261 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 CBSP35520 551 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 GRIA3P42263 894 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 RAB10P61026 200 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 CSHL1Q14406 222 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 CYP2A13Q16696 494 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 CRTC2Q53ET0 693 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 ZC3H12BQ5HYM0 836 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 BEND6Q5SZJ8 279 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 PRAMEF9Q5VWM5 478 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 MLIPQ5VWP3 458 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 FCRL6Q6DN72 434 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 SUSD1Q6UWL2 747 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 ATG14Q6ZNE5 492 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 UBE2R2Q712K3 238 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 SYVN1Q86TM6 617 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 ISCA2Q86U28 154 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 DSELQ8IZU8 1212 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 SHISA5Q8N114 240 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 ZNF655Q8N720 491 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 ENDOVQ8N8Q3 282 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 FBXO15Q8NCQ5 510 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 OR9A1PQ8NGU1 263 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 CDKL2Q92772 493 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 LRFN5Q96NI6 719 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 OR4K3Q96R72 315 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 ATOH8Q96SQ7 321 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 MIPEPQ99797 713 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 C17orf62Q9BQA9 187 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 DPH2Q9BQC3 489 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms