RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ULK1O75385 1050 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 CLPXO76031 633 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 CCDC159P0C7I6 412 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 OR56A5P0C7T3 313 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 PPP2R2BQ00005 443 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 TRAF3Q13114 568 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 ZNF234Q14588 700 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 TTLL9Q3SXZ7 439 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 RFTN2Q52LD8 501 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 RUNDC3AQ59EK9 446 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 C9orf64Q5T6V5 341 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 GTF2IRD2BQ6EKJ0 949 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 DPPA4Q7L190 304 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 GPR149Q86SP6 731 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 GTF2IRD2Q86UP8 949 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 SPARTQ8N0X7 666 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 ZNF548Q8NEK5 533 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 SKA2Q8WVK7 121 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 SNX19Q92543 992 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 FIG4Q92562 907 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 GTF2H4Q92759 462 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 FAM162AQ96A26 154 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 ULK4Q96C45 1275 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 LRIG1Q96JA1 1093 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 ADNPQ9H2P0 1102 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 TOR3AQ9H497 397 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 RAD21L1Q9H4I0 556 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 ACTR8Q9H981 624 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 RDH14Q9HBH5 336 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 KCTD5Q9NXV2 234 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 GDE1Q9NZC3 331 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 KLHL42Q9P2K6 505 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 LIMD1Q9UGP4 676 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 COQ6Q9Y2Z9 468 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 CCL27Q9Y4X3 112 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 POLR3HQ9Y535 204 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 HSPE1-MOB4S4R3N1 261 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 PLXNA2O75051 1894 aa10.7□□□□□ -0.7
SH3RF1-203ENST00000508685 TMEM202A6NGA9 273 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 CXCR6O00574 342 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 SLC16A6O15403 523 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 SGTAO43765 313 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 SLC34A2O95436 690 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 ITIH1P19827 911 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 MATN1P21941 496 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 AOAHP28039 575 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 ELK4P28324 431 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 DCDC1P59894 354 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 ABRAXAS2Q15018 415 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 HNRNPA1L2Q32P51 320 aaKnown RBP10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 ZIK1Q3SY52 487 aaPredicted RBP10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 XAF1Q6GPH4 301 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 SYCE2Q6PIF2 218 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 LIPIQ6XZB0 460 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 NEK10Q6ZWH5 1172 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 R3HCC1LQ7Z5L2 792 aaKnown RBP10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 MICU2Q8IYU8 434 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 ZCCHC7Q8N3Z6 543 aaKnown RBP10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 SETD9Q8NE22 299 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 CHPT1Q8WUD6 406 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 ZNF566Q969W8 418 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 RHBDF1Q96CC6 855 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 CHFRQ96EP1 664 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 PLA2G2FQ9BZM2 168 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 CD244Q9BZW8 370 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 PIF1Q9H611 641 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 RMND5AQ9H871 391 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 DCAF13Q9NV06 445 aaKnown RBP10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 OPTCQ9UBM4 332 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 DKK3Q9UBP4 350 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 PCDHGB1Q9Y5G3 927 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 DOCK8Q8NF50 2099 aa10.69□□□□□ -0.7
SH3RF1-203ENST00000508685 RSL1D1O76021 490 aaKnown RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 KRT6AP02538 564 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 KRT6BP04259 564 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 PGRP06401 933 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 PRPS2P11908 318 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 KRT6CP48668 564 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 CD97P48960 835 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 HTR6P50406 440 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 BMXP51813 675 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 DGKQP52824 942 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 PHEXP78562 749 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 GSTM4Q03013 218 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 OCA2Q04671 838 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 SELPLGQ14242 412 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ACOX1Q15067 660 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 IMPG1Q17R60 797 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 PYCR3Q53H96 274 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ERAP2Q6P179 960 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 MSANTD1Q6ZTZ1 278 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 TECPR1Q7Z6L1 1165 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 KIAA1958Q8N8K9 716 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 CHDHQ8NE62 594 aaPredicted RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 OR10A6Q8NH74 314 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 MAGEB10Q96LZ2 347 aaPredicted RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 GAS2L1Q99501 681 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms