RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SLC26A3P40879 764 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 PPP2R2AP63151 447 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 ALDH6A1Q02252 535 aaKnown RBP8.91□□□□□ -0.98
NEDD9-211ENST00000508546 ZNF33BQ06732 778 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 KCTD11Q693B1 232 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 H3F3CQ6NXT2 135 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 NEK10Q6ZWH5 1172 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 VRK3Q8IV63 474 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 KATNAL2Q8IYT4 538 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 OR4N4Q8N0Y3 316 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 EID3Q8N140 333 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 HMGCLL1Q8TB92 370 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 ASZ1Q8WWH4 475 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 NRGNQ92686 78 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 PDLIM2Q96JY6 352 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 SPATA13Q96N96 652 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 IL17FQ96PD4 163 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 DMRTA2Q96SC8 542 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 VKORC1Q9BQB6 163 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 TUBB6Q9BUF5 446 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 C10orf88Q9H8K7 445 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 MKKSQ9NPJ1 570 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-211ENST00000508546 IMPACTQ9P2X3 320 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 TRPC4Q9UBN4 977 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 TNFRSF10DQ9UBN6 386 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 SLC39A10Q9ULF5 831 aa8.91□□□□□ -0.98
NEDD9-211ENST00000508546 A0A0J9YVX5 310 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 OR2A25A4D2G3 310 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 MROH6A6NGR9 719 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 FOXO6A8MYZ6 492 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 STK10O94804 968 aaKnown RBP8.9□□□□□ -0.98
NEDD9-211ENST00000508546 SLCO2B1O94956 709 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 ERVK-10P10266 1014 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 CSE1LP55060 971 aaKnown RBP8.9□□□□□ -0.98
NEDD9-211ENST00000508546 HADHBP55084 474 aaKnown RBP8.9□□□□□ -0.98
NEDD9-211ENST00000508546 HSPA14Q0VDF9 509 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 SPARCL1Q14515 664 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 NAA25Q14CX7 972 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 GARNL3Q5VVW2 1013 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 PLAG1Q6DJT9 500 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 NCCRP1Q6ZVX7 275 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-211ENST00000508546 DOLPP1Q86YN1 238 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 CCDC50Q8IVM0 306 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 CDKL3Q8IVW4 592 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-211ENST00000508546 AMER3Q8N944 861 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 MDS2Q8NDY4 140 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 OR2L3Q8NG85 312 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 OR2A1Q8NGT9 310 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 CFAP61Q8NHU2 1237 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 ACTL9Q8TC94 416 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 AGAP11Q8TF27 550 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 CA5BP1Q8WTZ4 195 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 RAD51AP1Q96B01 352 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 SCMH1Q96GD3 660 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 CABS1Q96KC9 395 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 ZNF354BQ96LW1 612 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 ALS2CR12Q96Q35 445 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 DNAJC7Q99615 494 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 SMR3AQ99954 134 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 ZFYVE21Q9BQ24 234 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 TMEM121Q9BTD3 319 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 CARD6Q9BX69 1037 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 CIDEBQ9UHD4 219 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 INTUQ9ULD6 942 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 MKL2Q9ULH7 1088 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 ALG6Q9Y672 507 aa8.9□□□□□ -0.98
NEDD9-211ENST00000508546 OR51F1A6NGY5 319 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 NPIPA5E9PKD4 350 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 FAM227AF5H4B4 570 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 H0YGG7 62 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 ADAM10O14672 748 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 ASNA1O43681 348 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 OR1I1O60431 355 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 NRP2O60462 931 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 PHF2O75151 1096 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 ZNF189O75820 626 aaPredicted RBP8.89□□□□□ -0.99
NEDD9-211ENST00000508546 EIF2S1P05198 315 aaKnown RBP8.89□□□□□ -0.99
NEDD9-211ENST00000508546 CYC1P08574 325 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 RBP3P10745 1247 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 ABOP16442 354 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 TPH1P17752 444 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 PSMB5P28074 263 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 EEF1DP29692 281 aaKnown RBP8.89□□□□□ -0.99
NEDD9-211ENST00000508546 DNAJA1P31689 397 aaKnown RBP8.89□□□□□ -0.99
NEDD9-211ENST00000508546 IST1P53990 364 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 COPS2P61201 443 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 ARF3P61204 181 aaPredicted RBP8.89□□□□□ -0.99
NEDD9-211ENST00000508546 POU6F1Q14863 301 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 ACER2Q5QJU3 275 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 FBXO42Q6P3S6 717 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 TTC23LQ6PF05 361 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 SIAH3Q8IW03 269 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 CHERPQ8IWX8 916 aaKnown RBP8.89□□□□□ -0.99
NEDD9-211ENST00000508546 BEST3Q8N1M1 668 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 GHDCQ8N2G8 530 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 TMEM178AQ8NBL3 297 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 CHDHQ8NE62 594 aaPredicted RBP8.89□□□□□ -0.99
NEDD9-211ENST00000508546 OR8K1Q8NGG5 319 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 SDCCAG3Q96C92 435 aa8.89□□□□□ -0.99
NEDD9-211ENST00000508546 FRMD6Q96NE9 622 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms