RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 WASHC2DQ5SRD0 308 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 PRMT9Q6P2P2 845 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 C3orf62Q6ZUJ4 267 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 TTLL10Q6ZVT0 673 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 PAQR7Q86WK9 346 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 FBXO25Q8TCJ0 367 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 RERGQ96A58 199 aaPredicted RBP19.03■□□□□ 0.64
SFXN1-209ENST00000508290 MVB12AQ96EY5 273 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 OLFM1Q99784 485 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 CPNE1Q99829 537 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 HAUS8Q9BT25 410 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 SEMA4CQ9C0C4 833 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 WDR54Q9H977 334 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 DHCR7Q9UBM7 475 aaKnown RBP19.03■□□□□ 0.64
SFXN1-209ENST00000508290 PSAT1Q9Y617 370 aa19.03■□□□□ 0.64
SFXN1-209ENST00000508290 TCRBV9S1A1TA0A576 114 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 PRPF4O43172 522 aaKnown RBP eCLIP19.02■□□□□ 0.64
SFXN1-209ENST00000508290 ALAS2P22557 587 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 STX2P32856 288 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 FOLR3P41439 243 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 VSX2P58304 361 aaPredicted RBP19.02■□□□□ 0.64
SFXN1-209ENST00000508290 RPS18P62269 152 aaKnown RBP19.02■□□□□ 0.64
SFXN1-209ENST00000508290 TBPL1P62380 186 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 SSPNQ14714 243 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 ATP1A1-AS1Q5TC04 95 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 C1orf189Q5VU69 101 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 GARNL3Q5VVW2 1013 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 PRAMEF13Q5VWM6 474 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 LCN10Q6JVE6 187 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 AGTRAPQ6RW13 159 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 ZNF605Q86T29 641 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 PPFIBP2Q8ND30 876 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 OR2Y1Q8NGV0 311 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 C9orf43Q8TAL5 461 aaPredicted RBP19.02■□□□□ 0.64
SFXN1-209ENST00000508290 ADAMTS17Q8TE56 1095 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 THAP11Q96EK4 314 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 RUFY1Q96T51 708 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 MCMBPQ9BTE3 642 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 SLC26A1Q9H2B4 701 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 TMEM184CQ9NVA4 438 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 ARL15Q9NXU5 204 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 ADAMTS6Q9UKP5 1117 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 G3BP2Q9UN86 482 aaKnown RBP19.02■□□□□ 0.64
SFXN1-209ENST00000508290 CDC14AQ9UNH5 594 aa19.02■□□□□ 0.64
SFXN1-209ENST00000508290 ATRXP46100 2492 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 A0A0J9YVX5 310 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 HYKKA2RU49 373 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 FAM159BA6NKW6 160 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 FURINP09958 794 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 SSTR1P30872 391 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 GP5P40197 560 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 RRADP55042 308 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 IL10RAQ13651 578 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 GLE1Q53GS7 698 aaKnown RBP19.01■□□□□ 0.63
SFXN1-209ENST00000508290 MLIPQ5VWP3 458 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 CAPN13Q6MZZ7 669 aaPredicted RBP19.01■□□□□ 0.63
SFXN1-209ENST00000508290 MRPL14Q6P1L8 145 aaKnown RBP19.01■□□□□ 0.63
SFXN1-209ENST00000508290 FBXO42Q6P3S6 717 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 MED25Q71SY5 747 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 ADAMTSL2Q86TH1 951 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 MMGT1Q8N4V1 131 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 TMEM102Q8N9M5 508 aaPredicted RBP19.01■□□□□ 0.63
SFXN1-209ENST00000508290 ZNF592Q92610 1267 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 PTERQ96BW5 349 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 SGPP1Q9BX95 441 aa19.01■□□□□ 0.63
SFXN1-209ENST00000508290 HEMK1Q9Y5R4 338 aaPredicted RBP19.01■□□□□ 0.63
SFXN1-209ENST00000508290 PIEZO2Q9H5I5 2752 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 CFAP46Q8IYW2 2715 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 KCNE1BA0A087WTH5 132 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 IGKV1-8A0A0C4DH67 115 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 KLF7O75840 302 aaPredicted RBP19■□□□□ 0.63
SFXN1-209ENST00000508290 CTSBP07858 339 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 ITGAXP20702 1163 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 GRK3P35626 688 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 MAGEA4P43358 317 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 TAS2R39P59534 338 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 CDKL1Q00532 357 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 PRTGQ2VWP7 1150 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 FRMPD2BQ6IN97 320 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 LCTLQ6UWM7 567 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 ZDHHC24Q6UX98 284 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 OVCH1Q7RTY7 1134 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 ADCK2Q7Z695 626 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 C17orf64Q86WR6 236 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 KIF18AQ8NI77 898 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 FBXL8Q96CD0 374 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 VPS50Q96JG6 964 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 OR2A5Q96R48 311 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 GPAMQ9HCL2 828 aa19■□□□□ 0.63
SFXN1-209ENST00000508290 MTRF1LQ9UGC7 380 aaKnown RBP19■□□□□ 0.63
SFXN1-209ENST00000508290 CTAGE15A4D2H0 777 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 H0YGG7 62 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 KLHL41O60662 606 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 CTAGE8P0CG41 777 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 SPRP35270 261 aaPredicted RBP18.99■□□□□ 0.63
SFXN1-209ENST00000508290 HNMTP50135 292 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 ARF3P61204 181 aaPredicted RBP18.99■□□□□ 0.63
SFXN1-209ENST00000508290 RPS15AP62244 130 aaKnown RBP18.99■□□□□ 0.63
SFXN1-209ENST00000508290 NFATC3Q12968 1075 aa18.99■□□□□ 0.63
SFXN1-209ENST00000508290 PHKG1Q16816 387 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms