RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	METTL27	Q8N6F8	245 aa	Predicted RBP	13.54	□□□□□ -0.24
CCHCR1-222	ENST00000507459	VPS39	Q96JC1	886 aa		13.54	□□□□□ -0.24
CCHCR1-222	ENST00000507459	C17orf62	Q9BQA9	187 aa		13.54	□□□□□ -0.24
CCHCR1-222	ENST00000507459	RHOJ	Q9H4E5	214 aa		13.54	□□□□□ -0.24
CCHCR1-222	ENST00000507459	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.54	□□□□□ -0.24
CCHCR1-222	ENST00000507459	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.54	□□□□□ -0.24
CCHCR1-222	ENST00000507459	UTP6	Q9NYH9	597 aa	Known RBP	13.54	□□□□□ -0.24
CCHCR1-222	ENST00000507459	TXNDC16	Q9P2K2	825 aa		13.54	□□□□□ -0.24
CCHCR1-222	ENST00000507459	PADI2	Q9Y2J8	665 aa		13.54	□□□□□ -0.24
CCHCR1-222	ENST00000507459	PTRH2	Q9Y3E5	179 aa	Known RBP	13.54	□□□□□ -0.24
CCHCR1-222	ENST00000507459	FER1L5	A0AVI2	2057 aa		13.54	□□□□□ -0.24
CCHCR1-222	ENST00000507459		A0A1B0GX78	115 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	HYKK	A2RU49	373 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459		H0YGG7	62 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459		H7BY64	318 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	GUCA1C	O95843	209 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	SLC12A2	P55011	1212 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	FOXL2	P58012	376 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	GPX6	P59796	221 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	ARF3	P61204	181 aa	Predicted RBP	13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	TBPL1	P62380	186 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	ABAT	P80404	500 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	NAE1	Q13564	534 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	FAM214A	Q32MH5	1076 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	PRAMEF13	Q5VWM6	474 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	RNF44	Q7L0R7	432 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	ZNF605	Q86T29	641 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	PAQR7	Q86WK9	346 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	PLD3	Q8IV08	490 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	CEP97	Q8IW35	865 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	DTWD1	Q8N5C7	304 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	ZNF285	Q96NJ3	590 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	PRAP1	Q96NZ9	151 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	TRIM54	Q9BYV2	358 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	SLC25A18	Q9H1K4	315 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	ADNP	Q9H2P0	1102 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	ARL15	Q9NXU5	204 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	ANKMY1	Q9P2S6	941 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	IKZF3	Q9UKT9	509 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	MTO1	Q9Y2Z2	717 aa	Known RBP	13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	KALRN	O60229	2985 aa		13.53	□□□□□ -0.24
CCHCR1-222	ENST00000507459	CCDC88C	Q9P219	2028 aa		13.52	□□□□□ -0.24
CCHCR1-222	ENST00000507459	HEATR5B	Q9P2D3	2071 aa		13.52	□□□□□ -0.24
CCHCR1-222	ENST00000507459	COL6A6	A6NMZ7	2263 aa		13.52	□□□□□ -0.24
CCHCR1-222	ENST00000507459	ARGFX	A6NJG6	315 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	DSCR3	O14972	297 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	DNAJB5	O75953	348 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	GSTA2	P09210	222 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ZNF37A	P17032	561 aa	Predicted RBP	13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	OTX2	P32243	289 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	GCGR	P47871	477 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	OR1D4	P47884	311 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CHAF1B	Q13112	559 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ZNF425	Q6IV72	752 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	NKAP	Q8N5F7	415 aa	Known RBP	13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	NOA1	Q8NC60	698 aa	Known RBP	13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	MNS1	Q8NEH6	495 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	THAP4	Q8WY91	577 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	RERG	Q96A58	199 aa	Predicted RBP	13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PYCR2	Q96C36	320 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ABHD17A	Q96GS6	310 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PDLIM5	Q96HC4	596 aa	Known RBP	13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CPNE1	Q99829	537 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	DHRS4	Q9BTZ2	278 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	FAM117A	Q9C073	453 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CAB39L	Q9H9S4	337 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	LRRC4C	Q9HCJ2	640 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	GPAM	Q9HCL2	828 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	MAU2	Q9Y6X3	613 aa		13.52	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CTAGE15	A4D2H0	777 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	FITM1	A5D6W6	292 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	NPEPPSL1	A6NEC2	478 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	FAM159B	A6NKW6	160 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459		B8ZZF3	427 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	KIF2A	O00139	706 aa	Predicted RBP	13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CDC7	O00311	574 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	HAT1	O14929	419 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CNOT3	O75175	753 aa	Known RBP	13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	RFPL1	O75677	317 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	KLF7	O75840	302 aa	Predicted RBP	13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	MED26	O95402	600 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	STATH	P02808	62 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	TUBB4A	P04350	444 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CTAGE8	P0CG41	777 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	EZR	P15311	586 aa	Known RBP	13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ITGAX	P20702	1163 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	FOLR3	P41439	243 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	USP10	Q14694	798 aa	Known RBP	13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	HKDC1	Q2TB90	917 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	KBTBD12	Q3ZCT8	623 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CPZ	Q66K79	652 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CYS1	Q717R9	158 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CTAGE6	Q86UF2	777 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PTRH1	Q86Y79	214 aa	Known RBP	13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	TMEM151B	Q8IW70	566 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CTAGE4	Q8IX94	777 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms