RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SPNS1Q9H2V7 528 aa13.66□□□□□ -0.22
RNF4-208ENST00000507247 LRRN3Q9H3W5 708 aa13.66□□□□□ -0.22
RNF4-208ENST00000507247 MRPS30Q9NP92 439 aaKnown RBP13.66□□□□□ -0.22
RNF4-208ENST00000507247 EPHA6Q9UF33 1036 aa13.66□□□□□ -0.22
RNF4-208ENST00000507247 ATXN7L1Q9ULK2 861 aaPredicted RBP13.66□□□□□ -0.22
RNF4-208ENST00000507247 KLHL20Q9Y2M5 609 aa13.66□□□□□ -0.22
RNF4-208ENST00000507247 MDC1Q14676 2089 aaKnown RBP13.66□□□□□ -0.22
RNF4-208ENST00000507247 WDR87Q6ZQQ6 2873 aa13.66□□□□□ -0.22
RNF4-208ENST00000507247 DMXL1Q9Y485 3027 aa13.66□□□□□ -0.22
RNF4-208ENST00000507247 MN1Q10571 1320 aaPredicted RBP13.65□□□□□ -0.22
RNF4-208ENST00000507247 A0A0J9YY10 115 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 MATN2O00339 956 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 CLGNO14967 610 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 TNFSF14O43557 240 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 KATNA1O75449 491 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 OR4F21O95013 312 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 CCNDBP1O95273 360 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 MLYCDO95822 493 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 C9P02748 559 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
RNF4-208ENST00000507247 PVRP15151 417 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 GNAZP19086 355 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 MPSTP25325 297 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 VARSP26640 1264 aaKnown RBP13.65□□□□□ -0.22
RNF4-208ENST00000507247 CMPK1P30085 196 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 SERPINB5P36952 375 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 CCNG1P51959 295 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 ERVPABLB-1P60509 514 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 OCRLQ01968 901 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 MEF2AQ02078 507 aaPredicted RBP13.65□□□□□ -0.22
RNF4-208ENST00000507247 PCDH1Q08174 1060 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 GALNT1Q10472 559 aaPredicted RBP13.65□□□□□ -0.22
RNF4-208ENST00000507247 CHIT1Q13231 466 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 SQSTM1Q13501 440 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 E2F2Q14209 437 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 LETMD1Q6P1Q0 360 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 NXPE4Q6UWF7 544 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 FAM92BQ6ZTR7 304 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 CUZD1Q86UP6 607 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 OR4F6Q8NGB9 312 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 ATP6V1E2Q96A05 226 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 TGM7Q96PF1 710 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 CDC6Q99741 560 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 MAP3K3Q99759 626 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 TRMOQ9BU70 441 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 KLHL25Q9H0H3 589 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 CCDC134Q9H6E4 229 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 MID1IP1Q9NPA3 183 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 SLCO1B3Q9NPD5 702 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 THAP1Q9NVV9 213 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 RNF11Q9Y3C5 154 aa13.65□□□□□ -0.22
RNF4-208ENST00000507247 KCNE1BA0A087WTH5 132 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 H7BY64 318 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 NTN3O00634 580 aaPredicted RBP13.64□□□□□ -0.23
RNF4-208ENST00000507247 KIF1CO43896 1103 aaKnown RBP13.64□□□□□ -0.23
RNF4-208ENST00000507247 PRAMEF10O60809 474 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 WFS1O76024 890 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 HSPA4LO95757 839 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 OTCP00480 354 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 GP1BAP07359 652 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 C1GALT1C1LP0DN25 315 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 ST6GAL1P15907 406 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 MAGP20916 626 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 CDH3P22223 829 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 GRIA3P42263 894 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 FOXA1P55317 472 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 ABATP80404 500 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 IRF8Q02556 426 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 DOC2AQ14183 400 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 XKR6Q5GH73 641 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 ATG9BQ674R7 924 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 FCRL6Q6DN72 434 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 ZNF425Q6IV72 752 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 WDR74Q6RFH5 385 aaPredicted RBP13.64□□□□□ -0.23
RNF4-208ENST00000507247 GPRIN3Q6ZVF9 776 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 MILR1Q7Z6M3 343 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 FAM129CQ86XR2 697 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 L3MBTL4Q8NA19 623 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 DEFB124Q8NES8 71 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 ABHD11Q8NFV4 315 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 WDR34Q96EX3 536 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 PRAP1Q96NZ9 151 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 KCNA7Q96RP8 456 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 DPH7Q9BTV6 452 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 CAPS2Q9BXY5 557 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 ZMYND15Q9H091 742 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 SYNDIG1Q9H7V2 258 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 ACTR8Q9H981 624 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 PELI2Q9HAT8 420 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 TOR4AQ9NXH8 423 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 KLHL3Q9UH77 587 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 ZDHHC2Q9UIJ5 367 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 PCNX2A6NKB5 2137 aa13.64□□□□□ -0.23
RNF4-208ENST00000507247 TLCD2A6NGC4 264 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 TMEM233B4DJY2 109 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 TCP11X1B4DZS4 312 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 ZW10O43264 779 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 FKBP9O95302 570 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 ESRRBO95718 433 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 CPNE6O95741 557 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms