RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 MSNP26038 577 aaKnown RBP5.48□□□□□ -1.53
GYPB-208ENST00000507009 SOX11P35716 441 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 SLC1A1P43005 524 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 BDKRB1P46663 353 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 SCTRP47872 440 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 EIF3EP60228 445 aaKnown RBP5.48□□□□□ -1.53
GYPB-208ENST00000507009 CSNK1G2P78368 415 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 HSF1Q00613 529 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 ALDH6A1Q02252 535 aaKnown RBP5.48□□□□□ -1.53
GYPB-208ENST00000507009 IQCB1Q15051 598 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 INAQ16352 499 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 LONRF1Q17RB8 773 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 SYT16Q17RD7 645 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 ZNF766Q5HY98 468 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 LRRC38Q5VT99 294 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 DENND5AQ6IQ26 1287 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 CAVIN1Q6NZI2 390 aaKnown RBP5.48□□□□□ -1.53
GYPB-208ENST00000507009 TTC23LQ6PF05 361 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 TMEM200AQ86VY9 491 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 VRK3Q8IV63 474 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 CDKL3Q8IVW4 592 aaPredicted RBP5.48□□□□□ -1.53
GYPB-208ENST00000507009 OR4N4Q8N0Y3 316 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 KRT222Q8N1A0 295 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 DNAJB8Q8NHS0 232 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 GSDMBQ8TAX9 411 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 LKAAEAR1Q8TD35 194 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 PSMF1Q92530 271 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 HAS2Q92819 552 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 SLC22A18Q96BI1 424 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 SDCCAG3Q96C92 435 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 CHP1Q99653 195 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 HES7Q9BYE0 225 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 CHRNA10Q9GZZ6 450 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 GPAMQ9HCL2 828 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 ENAMQ9NRM1 1142 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 RIC8BQ9NVN3 520 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 NLE1Q9NVX2 485 aaPredicted RBP5.48□□□□□ -1.53
GYPB-208ENST00000507009 STMN3Q9NZ72 180 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 IL1RAPL1Q9NZN1 696 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 MKL2Q9ULH7 1088 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 RUVBL2Q9Y230 463 aaKnown RBP5.48□□□□□ -1.53
GYPB-208ENST00000507009 DYRK1BQ9Y463 629 aa5.48□□□□□ -1.53
GYPB-208ENST00000507009 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.48□□□□□ -1.53
GYPB-208ENST00000507009 A0A0A6YYC8 382 aaPredicted RBP5.47□□□□□ -1.53
GYPB-208ENST00000507009 CCDC162PA2VCL2 907 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 FAM90A27PA6NNH2 459 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 I3L1I5 382 aaPredicted RBP5.47□□□□□ -1.53
GYPB-208ENST00000507009 QSOX1O00391 747 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 RASGRF2O14827 1237 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 TTI1O43156 1089 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 PSTPIP1O43586 416 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 MBD3O95983 291 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 RPN2P04844 631 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 PTMAP06454 111 aaKnown RBP5.47□□□□□ -1.53
GYPB-208ENST00000507009 APOA4P06727 396 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 GSTM1P09488 218 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 RBP3P10745 1247 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 CD1EP15812 388 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 CAPN3P20807 821 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 CCR7P32248 378 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 YBX1P67809 324 aaKnown RBP5.47□□□□□ -1.53
GYPB-208ENST00000507009 MAT1AQ00266 395 aaKnown RBP5.47□□□□□ -1.53
GYPB-208ENST00000507009 OC90Q02509 493 aaPredicted RBP5.47□□□□□ -1.53
GYPB-208ENST00000507009 GSTM4Q03013 218 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 FASTKQ14296 549 aaKnown RBP5.47□□□□□ -1.53
GYPB-208ENST00000507009 TMED2Q15363 201 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 TESK1Q15569 626 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 MUM1Q2TAK8 710 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 BTBD16Q32M84 506 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 MINDY4Q4G0A6 757 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 CCSMST1Q4G0I0 132 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 DNAJC21Q5F1R6 531 aaKnown RBP5.47□□□□□ -1.53
GYPB-208ENST00000507009 YOD1Q5VVQ6 348 aaPredicted RBP5.47□□□□□ -1.53
GYPB-208ENST00000507009 ATG9BQ674R7 924 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 PRMT9Q6P2P2 845 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 SPNS3Q6ZMD2 512 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 CEP128Q6ZU80 1094 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 BBS12Q6ZW61 710 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 SPPL2CQ8IUH8 684 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 DCUN1D3Q8IWE4 304 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 RCOR2Q8IZ40 523 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 MMP21Q8N119 569 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 BEST3Q8N1M1 668 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 DNAAF3Q8N9W5 541 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 OR6P1Q8NGX9 317 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 OR2L8Q8NGY9 312 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 ACTL9Q8TC94 416 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 ADAMTS18Q8TE60 1221 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 AGAP11Q8TF27 550 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 CA5BP1Q8WTZ4 195 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 STYXQ8WUJ0 223 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 NRGNQ92686 78 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 KRT35Q92764 455 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 GTPBP3Q969Y2 492 aaKnown RBP5.47□□□□□ -1.53
GYPB-208ENST00000507009 CDKN2AIPNLQ96HQ2 116 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 C10orf90Q96M02 699 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 CCDC42Q96M95 316 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 SIGLEC12Q96PQ1 595 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 GRIP2Q9C0E4 1043 aa5.47□□□□□ -1.53
GYPB-208ENST00000507009 NHEJ1Q9H9Q4 299 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms