RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 C20orf96Q9NUD7 363 aaPredicted RBP13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 MAP10Q9P2G4 905 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 FBXO5Q9UKT4 447 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 RUVBL2Q9Y230 463 aaKnown RBP13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 NEU2Q9Y3R4 380 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 HS3ST3B1Q9Y662 390 aa13.77□□□□□ -0.21
HMGCS1-203ENST00000507004 E7ENX8 843 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 H0YGG7 62 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 GFYI3L273 518 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 SMAPO00193 183 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 SOCS6O14544 535 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 KIF5CO60282 957 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 HPP00738 406 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 EIF2S1P05198 315 aaKnown RBP13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 ANXA5P08758 320 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 ACPPP15309 386 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 PGAM1P18669 254 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 CCND1P24385 295 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 PSMB5P28074 263 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 OR1D4P47884 311 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 ARF3P61204 181 aaPredicted RBP13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 TAP2Q03519 686 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 RAPSNQ13702 412 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 FAM53BQ14153 422 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 ELOAQ14241 798 aaKnown RBP13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 FASTKQ14296 549 aaKnown RBP13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 PPP1R7Q15435 360 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 PLEKHN1Q494U1 663 aaPredicted RBP13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 B3GNTL1Q67FW5 361 aaPredicted RBP13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 FRMPD2BQ6IN97 320 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 ZNF425Q6IV72 752 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 FBXO42Q6P3S6 717 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 KIRREL2Q6UWL6 708 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 IGFL2Q6UWQ7 119 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 KIAA0408Q6ZU52 694 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 PAQR7Q86WK9 346 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 PALM2Q8IXS6 379 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 CSNK1A1LQ8N752 337 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 MCOLN3Q8TDD5 553 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 SSC4DQ8WTU2 575 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 THAP11Q96EK4 314 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 RUNDC3BQ96NL0 473 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 LMF1Q96S06 567 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 PKP4Q99569 1192 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 ACAT2Q9BWD1 397 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 MKKSQ9NPJ1 570 aaPredicted RBP13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 TAC3Q9UHF0 121 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 CCDC88CQ9P219 2028 aa13.76□□□□□ -0.21
HMGCS1-203ENST00000507004 A0A1W2PQ72 361 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 PABPN1LA6NDY0 278 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 SLC16A5O15375 505 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 SLC16A8O95907 504 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 C8GP07360 202 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 ZGLP1P0C6A0 271 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 TCP1P17987 556 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 SLC1A2P43004 574 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 SP140Q13342 867 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 CTBP1Q13363 440 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 TSTA3Q13630 321 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 TLR1Q15399 786 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 THEMIS2Q5TEJ8 643 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 DENND6AQ8IWF6 608 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 OR11G2Q8NGC1 345 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 ZNF480Q8WV37 535 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 SLCO2A1Q92959 643 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 FAM136AQ96C01 138 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 SNRNP40Q96DI7 357 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 SIGLEC10Q96LC7 697 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 CCDC138Q96M89 665 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 OSBPL9Q96SU4 736 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 AARSD1Q9BTE6 412 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 TGIF2Q9GZN2 237 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 SOX17Q9H6I2 414 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 FBXO6Q9NRD1 293 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 TMEM184CQ9NVA4 438 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 TAS2R13Q9NYV9 303 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 CTSFQ9UBX1 484 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 TRMT6Q9UJA5 497 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 C3orf18Q9UK00 162 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 CORO1CQ9ULV4 474 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 COPG1Q9Y678 874 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 SHANK1Q9Y566 2161 aa13.75□□□□□ -0.21
HMGCS1-203ENST00000507004 SPTBN1Q01082 2364 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 NUP210LQ5VU65 1888 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 LOC105369274A0A096LPK9 316 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 LOC102723532A0A0G2JNH3 316 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 BLACEA4D250 179 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 TCP11X1B4DZS4 312 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 GOLGA8MH3BSY2 632 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 SYF2O95926 243 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 HIST1H2AGP0C0S8 130 aaPredicted RBP13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 ATXN8OSP0DMR3 200 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 ICAM2P13598 275 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 HIST1H2ADP20671 130 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 TSFMP43897 325 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 AVPR1BP47901 424 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 UQCRFS1P47985 274 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 TERF1P54274 439 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 EMP2P54851 167 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 KLC1Q07866 573 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms