RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 SGPP1Q9BX95 441 aa13□□□□□ -0.33
PDCD6-204ENST00000506909 NLNQ9BYT8 704 aa13□□□□□ -0.33
PDCD6-204ENST00000506909 CHST8Q9H2A9 424 aa13□□□□□ -0.33
PDCD6-204ENST00000506909 GPAMQ9HCL2 828 aa13□□□□□ -0.33
PDCD6-204ENST00000506909 CCDC177Q9NQR7 707 aaPredicted RBP13□□□□□ -0.33
PDCD6-204ENST00000506909 ARL15Q9NXU5 204 aa13□□□□□ -0.33
PDCD6-204ENST00000506909 SNX7Q9UNH6 387 aa13□□□□□ -0.33
PDCD6-204ENST00000506909 FARSAQ9Y285 508 aaKnown RBP13□□□□□ -0.33
PDCD6-204ENST00000506909 MRPS18BQ9Y676 258 aaKnown RBP13□□□□□ -0.33
PDCD6-204ENST00000506909 ATMQ13315 3056 aa13□□□□□ -0.33
PDCD6-204ENST00000506909 MED13Q9UHV7 2174 aa13□□□□□ -0.33
PDCD6-204ENST00000506909 NUP210LQ5VU65 1888 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 FITM1A5D6W6 292 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 KATNA1O75449 491 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 CREG1O75629 220 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 CAPN1P07384 714 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 STMN1P16949 149 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 PTPN4P29074 926 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 PHBP35232 272 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 TBPL1P62380 186 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 CDC20Q12834 499 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 USP10Q14694 798 aaKnown RBP12.99□□□□□ -0.33
PDCD6-204ENST00000506909 GRM7Q14831 915 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 PPP1R3AQ16821 1122 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 ZXDCQ2QGD7 858 aaPredicted RBP12.99□□□□□ -0.33
PDCD6-204ENST00000506909 FAM214AQ32MH5 1076 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 THEMIS2Q5TEJ8 643 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 LCN10Q6JVE6 187 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 PCSK4Q6UW60 755 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 LCTLQ6UWM7 567 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 MBOAT1Q6ZNC8 495 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 ANKRD49Q8WVL7 239 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 ATL1Q8WXF7 558 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 FBXL8Q96CD0 374 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 BBC3Q96PG8 261 aaPredicted RBP12.99□□□□□ -0.33
PDCD6-204ENST00000506909 GBP5Q96PP8 586 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 SELENOSQ9BQE4 189 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 NDC1Q9BTX1 674 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 FUT8Q9BYC5 575 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 DERL2Q9GZP9 239 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 ATG10Q9H0Y0 220 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 CAB39LQ9H9S4 337 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 TMEM184CQ9NVA4 438 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 IRAK4Q9NWZ3 460 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 NINJ2Q9NZG7 142 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 IKZF3Q9UKT9 509 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 SCN3AQ9NY46 2000 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 COL6A6A6NMZ7 2263 aa12.99□□□□□ -0.33
PDCD6-204ENST00000506909 LOC105369274A0A096LPK9 316 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 LOC102723532A0A0G2JNH3 316 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 A0A0J9YVX5 310 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 CDC7O00311 574 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 NRP2O60462 931 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 ONECUT2O95948 504 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 CD63P08962 238 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 EZRP15311 586 aaKnown RBP12.98□□□□□ -0.33
PDCD6-204ENST00000506909 EMP3P54852 163 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 RAB10P61026 200 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 DCDP81605 110 aaKnown RBP12.98□□□□□ -0.33
PDCD6-204ENST00000506909 CDKL1Q00532 357 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 NAE1Q13564 534 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 ZKSCAN8Q15776 578 aaPredicted RBP12.98□□□□□ -0.33
PDCD6-204ENST00000506909 TBR1Q16650 682 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 PTCHD3Q3KNS1 767 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 LINC00303Q3SY05 128 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 TAF1BQ53T94 588 aaPredicted RBP12.98□□□□□ -0.33
PDCD6-204ENST00000506909 WASHC2DQ5SRD0 308 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 PRAMEF13Q5VWM6 474 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 FRMPD2BQ6IN97 320 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 FAM198BQ6UWH4 519 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 ADAMTSL2Q86TH1 951 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 SYVN1Q86TM6 617 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 IFT20Q8IY31 132 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 OR4N4Q8N0Y3 316 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 OR56A3Q8NH54 315 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 UBXN10Q96LJ8 280 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 RUFY1Q96T51 708 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 CYTH2Q99418 400 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 C17orf62Q9BQA9 187 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 CDC42EP4Q9H3Q1 356 aaKnown RBP12.98□□□□□ -0.33
PDCD6-204ENST00000506909 ACTL8Q9H568 366 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 ACSS3Q9H6R3 686 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 L2HGDHQ9H9P8 463 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 TXLNGQ9NUQ3 528 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 DHCR7Q9UBM7 475 aaKnown RBP12.98□□□□□ -0.33
PDCD6-204ENST00000506909 CTNNAL1Q9UBT7 734 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 OARD1Q9Y530 152 aa12.98□□□□□ -0.33
PDCD6-204ENST00000506909 C9J4A7 227 aa12.97□□□□□ -0.33
PDCD6-204ENST00000506909 H7BY64 318 aa12.97□□□□□ -0.33
PDCD6-204ENST00000506909 DSCR3O14972 297 aa12.97□□□□□ -0.33
PDCD6-204ENST00000506909 PHGDHO43175 533 aaKnown RBP12.97□□□□□ -0.33
PDCD6-204ENST00000506909 FAM155BO75949 473 aa12.97□□□□□ -0.33
PDCD6-204ENST00000506909 GUCA1CO95843 209 aa12.97□□□□□ -0.33
PDCD6-204ENST00000506909 ANXA5P08758 320 aa12.97□□□□□ -0.33
PDCD6-204ENST00000506909 PRKAR1AP10644 381 aa12.97□□□□□ -0.33
PDCD6-204ENST00000506909 NPPBP16860 134 aa12.97□□□□□ -0.33
PDCD6-204ENST00000506909 VSX2P58304 361 aaPredicted RBP12.97□□□□□ -0.33
PDCD6-204ENST00000506909 ERV3-1Q14264 604 aa12.97□□□□□ -0.33
PDCD6-204ENST00000506909 EFTUD2Q15029 972 aaKnown RBP eCLIP12.97□□□□□ -0.335e-7■■■■□ 26.2
PDCD6-204ENST00000506909 CAPN13Q6MZZ7 669 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms