RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ZNF425Q6IV72 752 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 IGFL3Q6UXB1 125 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 IGDCC3Q8IVU1 814 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 PPIL6Q8IXY8 311 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 ARHGEF39Q8N4T4 335 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 FBXO15Q8NCQ5 510 aaPredicted RBP13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 STT3BQ8TCJ2 826 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 CD200R1Q8TD46 325 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 KCNJ9Q92806 393 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 COL26A1Q96A83 441 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 SNRNP40Q96DI7 357 aaKnown RBP13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 OR2A5Q96R48 311 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 NAP1L3Q99457 506 aaPredicted RBP13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 ZFYVE21Q9BQ24 234 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 AARSD1Q9BTE6 412 aaKnown RBP13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 PLAC1Q9HBJ0 212 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 MRPS30Q9NP92 439 aaKnown RBP13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 FAM114A2Q9NRY5 505 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 TAC3Q9UHF0 121 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 SNX12Q9UMY4 172 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 G3BP2Q9UN86 482 aaKnown RBP13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 NAV2Q8IVL1 2488 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 ANKRD12Q6UB98 2062 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 ERVK-10P10266 1014 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 IVDP26440 423 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 HSD17B2P37059 387 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 SKIV2L2P42285 1042 aaKnown RBP13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 KLC1Q07866 573 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 AIMP2Q13155 320 aaKnown RBP13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 TSTA3Q13630 321 aaPredicted RBP13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 HKDC1Q2TB90 917 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 EIF2S3LQ2VIR3 472 aaKnown RBP13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 TTLL9Q3SXZ7 439 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 VWA2Q5GFL6 755 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 PRAMEF13Q5VWM6 474 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 ICE2Q659A1 982 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 PIWIL4Q7Z3Z4 852 aaKnown RBP13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 PLD3Q8IV08 490 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 PARP9Q8IXQ6 854 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 CPNE9Q8IYJ1 553 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 PRSS58Q8IYP2 241 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 SHISA5Q8N114 240 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 CISD2Q8N5K1 135 aaKnown RBP13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 AMER2Q8N7J2 671 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 OR11G2Q8NGC1 345 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 DDX47Q9H0S4 455 aaKnown RBP13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 RUVBL1Q9Y265 456 aaKnown RBP13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 B3GNT3Q9Y2A9 372 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 CSAG2Q9Y5P2 127 aa13.72□□□□□ -0.21
CDC42SE2-209ENST00000506419 IGLV3-12A0A075B6K2 115 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 BLACEA4D250 179 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 CES2O00748 559 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 FFAR3O14843 346 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 GPR42O15529 346 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 FOXS1O43638 330 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 ZBTB14O43829 449 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 SEMA7AO75326 666 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 SYF2O95926 243 aaKnown RBP13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 AHSGP02765 367 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 ZGLP1P0C6A0 271 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 ITGA3P26006 1051 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 IMPA1P29218 277 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 DHX9Q08211 1270 aaKnown RBP13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 MRPL49Q13405 166 aaKnown RBP13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 ATG9BQ674R7 924 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 PRMT9Q6P2P2 845 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 Q6ZS92 163 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 CUZD1Q86UP6 607 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 LMNTD2Q8IXW0 634 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 CSNK1A1LQ8N752 337 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 C2CD4AQ8NCU7 369 aaPredicted RBP13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 EEF1AKMT1Q8WVE0 214 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 PWWP2AQ96N64 755 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 EBNA1BP2Q99848 306 aaKnown RBP13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 SEMA3GQ9NS98 782 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 ABCF3Q9NUQ8 709 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 ASF1BQ9NVP2 202 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 CUEDC1Q9NWM3 386 aaPredicted RBP13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 ADAMTS6Q9UKP5 1117 aa13.71□□□□□ -0.21
CDC42SE2-209ENST00000506419 SHANK1Q9Y566 2161 aa13.71□□□□□ -0.22
CDC42SE2-209ENST00000506419 H7BY64 318 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 SMAPO00193 183 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 DNALI1O14645 258 aaPredicted RBP13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 HAT1O14929 419 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 RNF224P0DH78 156 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 ENO3P13929 434 aaPredicted RBP13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 PGAM1P18669 254 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 SLC26A3P40879 764 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 PGGT1BP53609 377 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 EMP3P54852 163 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 CDKN2DP55273 166 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 RELAQ04206 551 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 CRYMQ14894 314 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 PPP1R7Q15435 360 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 RBBP7Q16576 425 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 HIF1AQ16665 826 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 MUM1Q2TAK8 710 aa13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 RBM20Q5T481 1227 aaKnown RBP13.7□□□□□ -0.22
CDC42SE2-209ENST00000506419 PAQR3Q6TCH7 311 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms