RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PPARDQ03181 441 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 ILF2Q12905 390 aaKnown RBP3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 PTGISQ16647 500 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 ZFP69Q49AA0 526 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 GPR33Q49SQ1 333 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 CTR9Q6PD62 1173 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 SHQ1Q6PI26 577 aaKnown RBP3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 SLC25A47Q6Q0C1 308 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 Q6ZSR9 355 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 BTN2A1Q7KYR7 527 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 HOGA1Q86XE5 327 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 OR7A2PQ8NGA2 310 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 OR1L3Q8NH93 324 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 SETD6Q8TBK2 473 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 HCAR2Q8TDS4 363 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 C4orf45Q96LM5 186 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 NECTIN4Q96NY8 510 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 GBP5Q96PP8 586 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 MAP3K3Q99759 626 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 FERMT1Q9BQL6 677 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 FUCA2Q9BTY2 467 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 PITPNM3Q9BZ71 974 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 PLCXD1Q9NUJ7 323 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 TMEM181Q9P2C4 612 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 C19orf25Q9UFG5 118 aaPredicted RBP3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 FAM86B1E9PN63 330 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 SLCO1B7G3V0H7 640 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 ZNF195O14628 629 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 EIF5BO60841 1220 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 GAS8-AS1O95177 125 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 SERPING1P05155 500 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 FAM86B2P0C5J1 330 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 MYL6BP14649 208 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 GP5P40197 560 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 LEPRP48357 1165 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 RGS7P49802 495 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 GMPSP49915 693 aaPredicted RBP3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 CAPZA1P52907 286 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 LBHQ53QV2 105 aaPredicted RBP3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 FAM133BQ5BKY9 247 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 LRRC73Q5JTD7 316 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 CAVIN1Q6NZI2 390 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 SPATA21Q7Z572 469 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 NRARPQ7Z6K4 114 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 DNAJB7Q7Z6W7 309 aaPredicted RBP3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 THNSL1Q8IYQ7 743 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 LSMEM2Q8N112 164 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 RAB42Q8N4Z0 105 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 WDSUB1Q8N9V3 476 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 GPRC5AQ8NFJ5 357 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 OR5AP2Q8NGF4 316 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 OR10G8Q8NGN5 311 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 SPATA3Q8NHX4 192 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 OCC1Q8TAD7 63 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 APOBEC4Q8WW27 367 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 AZIN2Q96A70 460 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 PGM2Q96G03 612 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 ART5Q96L15 291 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 SPAG5Q96R06 1193 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 EDEM3Q9BZQ6 932 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 MTMR12Q9C0I1 747 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 RASAL2Q9UJF2 1139 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 WDR37Q9Y2I8 494 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 ANGPTL3Q9Y5C1 460 aa3.54□□□□□ -1.84
TOPBP1-204ENST00000505804 TRBV5-5A0A0J9YX44 114 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 O00370 1275 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 ZNF500O60304 480 aaPredicted RBP3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 PRAF2O60831 178 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 LUC7L3O95232 432 aaKnown RBP3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 MOCS3O95396 460 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 SEC24AO95486 1093 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 STAG3L1P0CL83 205 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 SLC2A2P11168 524 aaPredicted RBP3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 SCG2P13521 617 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 HOXC13P31276 330 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 DNA2P51530 1060 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 MYL7Q01449 175 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 PMP22Q01453 160 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 TNK1Q13470 666 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 CCDC6Q16204 474 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 TAZQ16635 292 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 UGCGQ16739 394 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 C14orf177Q52M58 125 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 SPECC1Q5M775 1068 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 SUSD4Q5VX71 490 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 LYSMD4Q5XG99 296 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 MOXD1Q6UVY6 613 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 SPATA19Q7Z5L4 167 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 METTL23Q86XA0 190 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 APCDD1Q8J025 514 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 SLC37A3Q8NCC5 494 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 OR2T6Q8NHC8 308 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 HEXDCQ8WVB3 486 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 METTL21AQ8WXB1 218 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 TSACCQ96A04 125 aaPredicted RBP3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 NDNQ99608 321 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 CLEC7AQ9BXN2 247 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 RIMS4Q9H426 269 aaPredicted RBP3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 ACTL8Q9H568 366 aa3.53□□□□□ -1.84
TOPBP1-204ENST00000505804 MAN2C1Q9NTJ4 1040 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms