RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 KCNJ11Q14654 390 aa23.54■■□□□ 1.36
HERC4-212ENST00000505760 ARHGAP19Q14CB8 494 aa23.54■■□□□ 1.36
HERC4-212ENST00000505760 ARMC3Q5W041 872 aa23.54■■□□□ 1.36
HERC4-212ENST00000505760 FBXO42Q6P3S6 717 aa23.54■■□□□ 1.36
HERC4-212ENST00000505760 IGFL2Q6UWQ7 119 aa23.54■■□□□ 1.36
HERC4-212ENST00000505760 C10orf90Q96M02 699 aa23.54■■□□□ 1.36
HERC4-212ENST00000505760 C5orf34Q96MH7 638 aa23.54■■□□□ 1.36
HERC4-212ENST00000505760 BARD1Q99728 777 aaKnown RBP23.54■■□□□ 1.36
HERC4-212ENST00000505760 C3orf18Q9UK00 162 aa23.54■■□□□ 1.36
HERC4-212ENST00000505760 MYO1CO00159 1063 aa23.53■■□□□ 1.36
HERC4-212ENST00000505760 MAP2K7O14733 419 aa23.53■■□□□ 1.36
HERC4-212ENST00000505760 PHF2O75151 1096 aa23.53■■□□□ 1.36
HERC4-212ENST00000505760 PSIP1O75475 530 aaKnown RBP23.53■■□□□ 1.36
HERC4-212ENST00000505760 HPP00738 406 aa23.53■■□□□ 1.36
HERC4-212ENST00000505760 CDC16Q13042 620 aa23.53■■□□□ 1.36
HERC4-212ENST00000505760 CENPUQ71F23 418 aa23.53■■□□□ 1.36
HERC4-212ENST00000505760 PRELID2Q8N945 189 aa23.53■■□□□ 1.36
HERC4-212ENST00000505760 PLCD4Q9BRC7 762 aa23.53■■□□□ 1.36
HERC4-212ENST00000505760 ZNF160Q9HCG1 818 aa23.53■■□□□ 1.36
HERC4-212ENST00000505760 INTS10Q9NVR2 710 aaKnown RBP23.53■■□□□ 1.36
HERC4-212ENST00000505760 UTP6Q9NYH9 597 aaKnown RBP23.53■■□□□ 1.36
HERC4-212ENST00000505760 CDC14AQ9UNH5 594 aa23.53■■□□□ 1.36
HERC4-212ENST00000505760 CTAGE9A4FU28 777 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 ZNF839A8K0R7 811 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 USP1O94782 785 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 LDLRP01130 860 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 HSD17B2P37059 387 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 PNLIPRP1P54315 467 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 EMP3P54852 163 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 Q0VFX4 171 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 DHX34Q14147 1143 aaKnown RBP23.52■■□□□ 1.36
HERC4-212ENST00000505760 ZNF169Q14929 603 aaPredicted RBP23.52■■□□□ 1.36
HERC4-212ENST00000505760 PRTGQ2VWP7 1150 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 TTLL9Q3SXZ7 439 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 VWA2Q5GFL6 755 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 ZNF470Q6ECI4 717 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 ISLR2Q6UXK2 745 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 LINC00696Q6ZRV3 163 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 MAMDC2Q7Z304 686 aaPredicted RBP23.52■■□□□ 1.36
HERC4-212ENST00000505760 CSNK1A1LQ8N752 337 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 ZNF669Q96BR6 464 aaPredicted RBP23.52■■□□□ 1.36
HERC4-212ENST00000505760 C8orf44Q96CB5 159 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 MESP1Q9BRJ9 268 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 YIPF2Q9BWQ6 316 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 TAC3Q9UHF0 121 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 SVILO95425 2214 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 POLEQ07864 2286 aa23.52■■□□□ 1.36
HERC4-212ENST00000505760 CELSR2Q9HCU4 2923 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 ITPR2Q14571 2701 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.51■■□□□ 1.35
HERC4-212ENST00000505760 WIPF3A6NGB9 483 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 PRPF4O43172 522 aaKnown RBP eCLIP23.51■■□□□ 1.351e-9■■■□□ 16.5
HERC4-212ENST00000505760 CCNDBP1O95273 360 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 MAGEA6P43360 314 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 TSFMP43897 325 aaKnown RBP23.51■■□□□ 1.35
HERC4-212ENST00000505760 DSG2Q14126 1118 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 TLR1Q15399 786 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 ICE2Q659A1 982 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 B3GNTL1Q67FW5 361 aaPredicted RBP23.51■■□□□ 1.35
HERC4-212ENST00000505760 CAND1Q86VP6 1230 aaKnown RBP23.51■■□□□ 1.35
HERC4-212ENST00000505760 PAQR7Q86WK9 346 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 REXO1L1PQ8IX06 675 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 ST6GALNAC3Q8NDV1 305 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 RERGQ96A58 199 aaPredicted RBP23.51■■□□□ 1.35
HERC4-212ENST00000505760 PKP4Q99569 1192 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 TRIM56Q9BRZ2 755 aaKnown RBP23.51■■□□□ 1.35
HERC4-212ENST00000505760 CCDC68Q9H2F9 335 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 TRPC4Q9UBN4 977 aa23.51■■□□□ 1.35
HERC4-212ENST00000505760 IGLV3-12A0A075B6K2 115 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 FAM237BA0A1B0GVD1 139 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 MAGEB16A2A368 324 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 KRT14P02533 472 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 CLCN7P51798 805 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 PRDX1Q06830 199 aaKnown RBP23.5■■□□□ 1.35
HERC4-212ENST00000505760 MFAP5Q13361 173 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 THOC5Q13769 683 aaKnown RBP23.5■■□□□ 1.35
HERC4-212ENST00000505760 ANKRD22Q5VYY1 191 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 ATG9BQ674R7 924 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 NEK10Q6ZWH5 1172 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 KBTBD2Q8IY47 623 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 MVB12AQ96EY5 273 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 ABCF3Q9NUQ8 709 aa23.5■■□□□ 1.35
HERC4-212ENST00000505760 RUVBL1Q9Y265 456 aaKnown RBP23.5■■□□□ 1.35
HERC4-212ENST00000505760 NSG1A0A0A6YYJ2 146 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 IGKV1-8A0A0C4DH67 115 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 SDR42E2A6NKP2 422 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 SLC16A8O95907 504 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 SYF2O95926 243 aaKnown RBP23.49■■□□□ 1.35
HERC4-212ENST00000505760 MLNP12872 115 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 EZRP15311 586 aaKnown RBP23.49■■□□□ 1.35
HERC4-212ENST00000505760 CXCR2P25025 360 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 EMP2P54851 167 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 CUL1Q13616 776 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 HKDC1Q2TB90 917 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 ADCK2Q7Z695 626 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 LAPTM4BQ86VI4 370 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 KCNMB4Q86W47 210 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 ZGRF1Q86YA3 2104 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 PPFIBP2Q8ND30 876 aa23.49■■□□□ 1.35
HERC4-212ENST00000505760 GRHL3Q8TE85 626 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms