RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 MBD1Q9UIS9 605 aaPredicted RBP10.97□□□□□ -0.65
NFKB1-205ENST00000505458 PCNTO95613 3336 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 DPPA5A6NC42 116 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 GRXCR1A8MXD5 290 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 RFXANKO14593 260 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 RXRGP48443 463 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 TBPL1P62380 186 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 CTBSQ01459 385 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 DMPKQ09013 629 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 MYBPC3Q14896 1274 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 SHHQ15465 462 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 POM121L1PQ3SYA9 428 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 IKBIPQ70UQ0 350 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 SPRED2Q7Z698 418 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 SLC5A11Q8WWX8 675 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 ASB12Q8WXK4 309 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 RNF145Q96MT1 663 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 ZNF583Q96ND8 569 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 TMEM74Q96NL1 305 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 RAD21L1Q9H4I0 556 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 THEGQ9P2T0 379 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 DLGAP4Q9Y2H0 992 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 E7EQ34 232 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 KIF1CO43896 1103 aaKnown RBP10.96□□□□□ -0.65
NFKB1-205ENST00000505458 EPN2O95208 641 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 ACADLP28330 430 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 PBLDP30039 288 aaPredicted RBP10.96□□□□□ -0.65
NFKB1-205ENST00000505458 CNTN1Q12860 1018 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 ZXDCQ2QGD7 858 aaPredicted RBP10.96□□□□□ -0.65
NFKB1-205ENST00000505458 KRT80Q6KB66 452 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 HMBOX1Q6NT76 420 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 CALHM3Q86XJ0 350 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 CHERPQ8IWX8 916 aaKnown RBP10.96□□□□□ -0.65
NFKB1-205ENST00000505458 GALNT4Q8N4A0 578 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 ZNF480Q8WV37 535 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 TIMM29Q9BSF4 260 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 YTHDF1Q9BYJ9 559 aaKnown RBP10.96□□□□□ -0.65
NFKB1-205ENST00000505458 NT5DC2Q9H857 520 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 VAPAQ9P0L0 249 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 ZNF639Q9UID6 485 aa10.96□□□□□ -0.65
NFKB1-205ENST00000505458 SAMD4AQ9UPU9 718 aaKnown RBP10.96□□□□□ -0.65
NFKB1-205ENST00000505458 RNF103-CHMP3A0A140T963 221 aa10.96□□□□□ -0.66
NFKB1-205ENST00000505458 TMEM202A6NGA9 273 aa10.96□□□□□ -0.66
NFKB1-205ENST00000505458 DFNA5O60443 496 aa10.96□□□□□ -0.66
NFKB1-205ENST00000505458 HRH2P25021 359 aa10.96□□□□□ -0.66
NFKB1-205ENST00000505458 TIA1P31483 386 aaKnown RBP eCLIP10.96□□□□□ -0.66
NFKB1-205ENST00000505458 OR4D2P58180 307 aa10.96□□□□□ -0.66
NFKB1-205ENST00000505458 MTPNP58546 118 aa10.96□□□□□ -0.66
NFKB1-205ENST00000505458 FAM162AQ96A26 154 aa10.96□□□□□ -0.66
NFKB1-205ENST00000505458 NECTIN4Q96NY8 510 aa10.96□□□□□ -0.66
NFKB1-205ENST00000505458 NKX2-4Q9H2Z4 354 aa10.96□□□□□ -0.66
NFKB1-205ENST00000505458 RPF2Q9H7B2 306 aaKnown RBP10.96□□□□□ -0.66
NFKB1-205ENST00000505458 KAT8Q9H7Z6 458 aaKnown RBP10.96□□□□□ -0.66
NFKB1-205ENST00000505458 MYO7AQ13402 2215 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 COX7A2P14406 83 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 ZNF8P17098 575 aaPredicted RBP10.95□□□□□ -0.66
NFKB1-205ENST00000505458 ZNF648Q5T619 568 aaPredicted RBP10.95□□□□□ -0.66
NFKB1-205ENST00000505458 DTWD1Q8N5C7 304 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 OR7G3Q8NG95 312 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 APIPQ96GX9 242 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 QRFPRQ96P65 431 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 TSSK3Q96PN8 268 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 TEX101Q9BY14 249 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 BHLHE41Q9C0J9 482 aaPredicted RBP10.95□□□□□ -0.66
NFKB1-205ENST00000505458 OR52A5Q9H2C5 316 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 CXCR6O00574 342 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 SCAMP2O15127 329 aaKnown RBP10.95□□□□□ -0.66
NFKB1-205ENST00000505458 CLOCKO15516 846 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 SEMA3DO95025 777 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 PRSS23O95084 383 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 ERGP11308 486 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 GSTM2P28161 218 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 RPS21P63220 83 aaKnown RBP10.95□□□□□ -0.66
NFKB1-205ENST00000505458 CDK3Q00526 305 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 PLA2G4EQ3MJ16 856 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 PRAMEF14Q5SWL7 426 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 PRAMEF13Q5VWM6 474 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 NXPE4Q6UWF7 544 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 CARM1Q86X55 608 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 CHPFQ8IZ52 775 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 CHTF18Q8WVB6 975 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 MTFMTQ96DP5 389 aaKnown RBP10.95□□□□□ -0.66
NFKB1-205ENST00000505458 C11orf24Q96F05 449 aaPredicted RBP10.95□□□□□ -0.66
NFKB1-205ENST00000505458 TRIT1Q9H3H1 467 aaKnown RBP10.95□□□□□ -0.66
NFKB1-205ENST00000505458 ZDHHC4Q9NPG8 344 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 DNAJB9Q9UBS3 223 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 RPS6KA6Q9UK32 745 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 COQ6Q9Y2Z9 468 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 CEP350Q5VT06 3117 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 H0YAE9 185 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 HOXB9P17482 250 aaPredicted RBP10.95□□□□□ -0.66
NFKB1-205ENST00000505458 RPL5P46777 297 aaKnown RBP10.95□□□□□ -0.66
NFKB1-205ENST00000505458 EGFLAMQ63HQ2 1017 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 AMIGO2Q86SJ2 522 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 TMPRSS11BQ86T26 416 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 HEATR4Q86WZ0 1026 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 KRTCAP2Q8N6L1 136 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 ZFP28Q8NHY6 868 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 FAM131CQ96AQ9 280 aa10.95□□□□□ -0.66
NFKB1-205ENST00000505458 PHF12Q96QT6 1004 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms