RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ZBTB11O95625 1053 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 CYC1P08574 325 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 PIK3CGP48736 1102 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 PTCHD3Q3KNS1 767 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 KANK2Q63ZY3 851 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 GOLGA7Q7Z5G4 137 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 ALYREFQ86V81 257 aaKnown RBP7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 LCN9Q8WX39 176 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 OSGEPL1Q9H4B0 414 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 CCDC177Q9NQR7 707 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 TLK1Q9UKI8 766 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 APOBEC2Q9Y235 224 aaKnown RBP7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 PCDHB3Q9Y5E6 796 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 PCDHGA4Q9Y5G9 962 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 ASXL3Q9C0F0 2248 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 A0A1B0GTL3 188 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 PIPSLA2A3N6 862 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 PDZK1P1A8MUH7 402 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 CAPN5O15484 640 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 HCRTR1O43613 425 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 SNX2O60749 519 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 SLCO1A2P46721 670 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 SCTRP47872 440 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 AGTR2P50052 363 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 C21orf58P58505 322 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 XKR7Q5GH72 579 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 PRAMEF13Q5VWM6 474 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 KLC3Q6P597 504 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 TRIM46Q7Z4K8 759 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 B3GNT8Q7Z7M8 397 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 SPATA6LQ8N4H0 392 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 ANKRD53Q8N9V6 530 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 NEIL2Q969S2 332 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 METTL2AQ96IZ6 378 aaKnown RBP7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 CNDP1Q96KN2 507 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 IL17FQ96PD4 163 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 DEPDC7Q96QD5 511 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 HGH1Q9BTY7 390 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 SLC29A3Q9BZD2 475 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 SPNS1Q9H2V7 528 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 CDV3Q9UKY7 258 aaKnown RBP7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 RNF112Q9ULX5 631 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 PLAGL1Q9UM63 463 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 IKBKGQ9Y6K9 419 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 RGS16O15492 202 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 MT-CO3P00414 261 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 CAPN1P07384 714 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 EBLN1P0CF75 366 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 ST6GAL1P15907 406 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 ATXN3P54252 364 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 SLC12A2P55011 1212 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 KRT71Q3SY84 523 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 NKAIN2Q5VXU1 208 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 DTX1Q86Y01 620 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 GALNT15Q8N3T1 639 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 PTCD3Q96EY7 689 aaKnown RBP7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 SLC26A1Q9H2B4 701 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 FAM60AQ9NP50 221 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 TNFRSF12AQ9NP84 129 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 LHX9Q9NQ69 397 aa7.95□□□□□ -1.14
CDC42SE2-208ENST00000505065 ADRB1P08588 477 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 PIK3CBP42338 1070 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 INHBCP55103 352 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 HSD11B2P80365 405 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 CAPN13Q6MZZ7 669 aaPredicted RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 TMEM214Q6NUQ4 689 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 SLC5A11Q8WWX8 675 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 ZNF764Q96H86 408 aaPredicted RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 SLC38A3Q99624 504 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 ZPBPQ9BS86 351 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 BRF2Q9HAW0 419 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 CLK4Q9HAZ1 481 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 GEMIN8Q9NWZ8 242 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 MID2Q9UJV3 735 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 CACNA1AO00555 2505 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 WDR47O94967 919 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 RECKO95980 971 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 C1GALT1C1LP0DN25 315 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 JUPP14923 745 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 CD82P27701 267 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 PSMB5P28074 263 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 TSFMP43897 325 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 CCT5P48643 541 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 PKNOX1P55347 436 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 YBX1P67809 324 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 OCRLQ01968 901 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 PDK4Q16654 411 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 SMU1Q2TAY7 513 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 GFM1Q96RP9 751 aaKnown RBP7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 CTRCQ99895 268 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 DNAJC11Q9NVH1 559 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 ADGRE2Q9UHX3 823 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 MSRB2Q9Y3D2 182 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 KIF26BQ2KJY2 2108 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 STK16O75716 305 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 KRT15P19012 456 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 LAPTM5Q13571 262 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 PWP1Q13610 501 aa7.94□□□□□ -1.14
CDC42SE2-208ENST00000505065 C16orf72Q14CZ0 275 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms