RNA–Protein interactions for RNA: ENST00000504858.5

NECAP2-209, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 5

Gene NECAP2, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-209ENST00000504858 IP6K3Q96PC2 410 aa16.02■□□□□ 0.16
NECAP2-209ENST00000504858 CPNE1Q99829 537 aa16.02■□□□□ 0.16
NECAP2-209ENST00000504858 ACAT2Q9BWD1 397 aa16.02■□□□□ 0.16
NECAP2-209ENST00000504858 SGPP1Q9BX95 441 aa16.02■□□□□ 0.16
NECAP2-209ENST00000504858 WDR54Q9H977 334 aa16.02■□□□□ 0.16
NECAP2-209ENST00000504858 CCDC177Q9NQR7 707 aaPredicted RBP16.02■□□□□ 0.16
NECAP2-209ENST00000504858 SMYD2Q9NRG4 433 aa16.02■□□□□ 0.16
NECAP2-209ENST00000504858 CUTCQ9NTM9 273 aa16.02■□□□□ 0.16
NECAP2-209ENST00000504858 DHCR7Q9UBM7 475 aaKnown RBP16.02■□□□□ 0.16
NECAP2-209ENST00000504858 ZNF462Q96JM2 2506 aa16.02■□□□□ 0.15
NECAP2-209ENST00000504858 FAM95CA0A1B0GW59 222 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 CDC14CA4D256 554 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 URI1O94763 535 aaPredicted RBP16.01■□□□□ 0.15
NECAP2-209ENST00000504858 WISP3O95389 354 aaPredicted RBP16.01■□□□□ 0.15
NECAP2-209ENST00000504858 SYF2O95926 243 aaKnown RBP16.01■□□□□ 0.15
NECAP2-209ENST00000504858 HIST1H2AGP0C0S8 130 aaPredicted RBP16.01■□□□□ 0.15
NECAP2-209ENST00000504858 PIM1P11309 404 aaPredicted RBP16.01■□□□□ 0.15
NECAP2-209ENST00000504858 HIST1H2ADP20671 130 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 ITGAXP20702 1163 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 YBX1P67809 324 aaKnown RBP16.01■□□□□ 0.15
NECAP2-209ENST00000504858 POU4F1Q01851 419 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 GUCY2DQ02846 1103 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 PHKG1Q16816 387 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 WASHC2DQ5SRD0 308 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 FRMPD2BQ6IN97 320 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 C8orf74Q6P047 294 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 SBSNQ6UWP8 590 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 C3orf62Q6ZUJ4 267 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 SPNS2Q8IVW8 549 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 MMGT1Q8N4V1 131 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 PPFIBP2Q8ND30 876 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 OR2Y1Q8NGV0 311 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 MVB12AQ96EY5 273 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 VPS39Q96JC1 886 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 HIST1H2AHQ96KK5 128 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 OR2A5Q96R48 311 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 HIST1H2AJQ99878 128 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 H2AFJQ9BTM1 129 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 SLC22A11Q9NSA0 550 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 ZDHHC18Q9NUE0 388 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 TMEM184CQ9NVA4 438 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 MAN2B2Q9Y2E5 1009 aa16.01■□□□□ 0.15
NECAP2-209ENST00000504858 KCNE1BA0A087WTH5 132 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 LOC105369274A0A096LPK9 316 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 LOC102723532A0A0G2JNH3 316 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 A0A0J9YVX5 310 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 TXNDC9O14530 226 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 NRP2O60462 931 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 RFPL1O75677 317 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 VSX2P58304 361 aaPredicted RBP16■□□□□ 0.15
NECAP2-209ENST00000504858 GPX6P59796 221 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 TBPL1P62380 186 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 CDKL1Q00532 357 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 NAB1Q13506 487 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 SSPNQ14714 243 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 PPP1R3AQ16821 1122 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 GARNL3Q5VVW2 1013 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 PRMT9Q6P2P2 845 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 AGTRAPQ6RW13 159 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 LCTLQ6UWM7 567 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 TMEM207Q6UWW9 146 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 TTLL10Q6ZVT0 673 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 RELL1Q8IUW5 271 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 OR4N4Q8N0Y3 316 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 ARHGEF39Q8N4T4 335 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 MNS1Q8NEH6 495 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 OR56A3Q8NH54 315 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 ATL1Q8WXF7 558 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 FBXL8Q96CD0 374 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 LRRC1Q9BTT6 524 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 SARGQ9BW04 601 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 TRIM54Q9BYV2 358 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 IRAK4Q9NWZ3 460 aa16■□□□□ 0.15
NECAP2-209ENST00000504858 IFT80Q9P2H3 777 aaPredicted RBP16■□□□□ 0.15
NECAP2-209ENST00000504858 HYKKA2RU49 373 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 H0YGG7 62 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 GP5P40197 560 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 MAGEA4P43358 317 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 TAS2R39P59534 338 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 ARF3P61204 181 aaPredicted RBP15.99■□□□□ 0.15
NECAP2-209ENST00000504858 NFKB2Q00653 900 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 TRADDQ15628 312 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 ZXDCQ2QGD7 858 aaPredicted RBP15.99■□□□□ 0.15
NECAP2-209ENST00000504858 MUM1Q2TAK8 710 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 GLE1Q53GS7 698 aaKnown RBP15.99■□□□□ 0.15
NECAP2-209ENST00000504858 C1orf189Q5VU69 101 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 PRAMEF13Q5VWM6 474 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 TCTN3Q6NUS6 607 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 OVCH1Q7RTY7 1134 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 RAB43Q86YS6 212 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 TMEM102Q8N9M5 508 aaPredicted RBP15.99■□□□□ 0.15
NECAP2-209ENST00000504858 THAP11Q96EK4 314 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 GPR22Q99680 433 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 RBBP8Q99708 897 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 HAUS8Q9BT25 410 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 LRRC4CQ9HCJ2 640 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 MLXIPLQ9NP71 852 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 NDOR1Q9UHB4 597 aa15.99■□□□□ 0.15
NECAP2-209ENST00000504858 GPN3Q9UHW5 284 aaPredicted RBP15.99■□□□□ 0.15
NECAP2-209ENST00000504858 NXT1Q9UKK6 140 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms