RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 APOC4-APOC2K7ER74 178 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 PRPF4O43172 522 aaKnown RBP eCLIP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 SEC24DO94855 1032 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 APOC2P02655 101 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 APOA4P06727 396 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 ANXA5P08758 320 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 RBP3P10745 1247 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 CD99P14209 185 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 HOXB4P17483 251 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 FOXN2P32314 431 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 ANP32AP39687 249 aaKnown RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 COPS2P61201 443 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 YBX1P67809 324 aaKnown RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 OC90Q02509 493 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 PLOD1Q02809 727 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 GRB7Q14451 532 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 TMED2Q15363 201 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 ASTE1Q2TB18 679 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 BTBD16Q32M84 506 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 CCSMST1Q4G0I0 132 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 CCDC38Q502W7 563 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 CAVIN1Q6NZI2 390 aaKnown RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 TTC23LQ6PF05 361 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 PACS1Q6VY07 963 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 CLEC17AQ6ZS10 378 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 BBS12Q6ZW61 710 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 RNF44Q7L0R7 432 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 ZC3H7AQ8IWR0 971 aaKnown RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 KATNAL2Q8IYT4 538 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 RAB42Q8N4Z0 105 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 CSNK1A1LQ8N752 337 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 OR2L3Q8NG85 312 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 GSDMBQ8TAX9 411 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 STYXQ8WUJ0 223 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 KRT35Q92764 455 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 CCDC42Q96M95 316 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 CHP1Q99653 195 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 SPOCK3Q9BQ16 436 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 ACAT2Q9BWD1 397 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 TSSK1BQ9BXA7 367 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 FEZ2Q9UHY8 353 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 CDC14AQ9UNH5 594 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 RUVBL1Q9Y265 456 aaKnown RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 HIVEP1P15822 2718 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 PRRC2CQ9Y520 2896 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 CSMD2Q7Z408 3487 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 ADGRG4Q8IZF6 3080 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 A0A0U1RQJ8 604 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 TARM1B6A8C7 271 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 H0YGG7 62 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 PJA2O43164 708 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 SLCO2B1O94956 709 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 TSPAN12O95859 305 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 GOT2P00505 430 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 STATHP02808 62 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 C8orf89P0DMQ9 161 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 DRD2P14416 443 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 EEF1DP29692 281 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 CMPK1P30085 196 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 EFNA3P52797 238 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 ARF3P61204 181 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 AP2B1P63010 937 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 TUBA3CQ13748 450 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 FASTKQ14296 549 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 OR1C1Q15619 314 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 HKDC1Q2TB90 917 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 PRTGQ2VWP7 1150 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 MINDY4Q4G0A6 757 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 KRTCAP3Q53RY4 240 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 SPINK14Q6IE38 97 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 TUBA3EQ6PEY2 450 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 BLOC1S3Q6QNY0 202 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 AFTPHQ6ULP2 937 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 UNC5DQ6UXZ4 953 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 Q6ZPB1 254 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 CEP128Q6ZU80 1094 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 LANCL3Q6ZV70 420 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 GALNTL5Q7Z4T8 443 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 LDB1Q86U70 411 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 CRLF3Q8IUI8 442 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 RCOR2Q8IZ40 523 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 GHDCQ8N2G8 530 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 AMER3Q8N944 861 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 DNAAF3Q8N9W5 541 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 FAM98AQ8NCA5 519 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 MDS2Q8NDY4 140 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 THAP3Q8WTV1 239 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 METTL21AQ8WXB1 218 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 HDAC10Q969S8 669 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 ZUFSPQ96AP4 578 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 IMMP1LQ96LU5 166 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 FRMD6Q96NE9 622 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 SIGLEC12Q96PQ1 595 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 PPP1R2P1Q96PQ5 205 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 TTC1Q99614 292 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 ZFYVE21Q9BQ24 234 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 C19orf43Q9BQ61 176 aa6.53□□□□□ -1.36
NPIPB3-203ENST00000504841 UTP23Q9BRU9 249 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms