RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 SEC14L5O43304 696 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GPRIN2O60269 458 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 STAMBPO95630 424 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 NTN1O95631 604 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ADAP00813 363 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 IL1AP01583 271 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 S100A9P06702 114 aaKnown RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SBK2P0C263 348 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ANXA7P20073 488 aaKnown RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 NR2F2P24468 414 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SERPINB6P35237 376 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PTPN9P43378 593 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RGS19P49795 217 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SERPINH1P50454 418 aaKnown RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZNF75DP51815 510 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MTTPP55157 894 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CDH13P55290 713 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RPS8P62241 208 aaKnown RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SIRPAP78324 504 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 B4GALNT1Q00973 533 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GALK2Q01415 458 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GCNT1Q02742 428 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SRSF1Q07955 248 aaKnown RBP eCLIP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PDZK1IP1Q13113 114 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MTX1Q13505 466 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GALNT3Q14435 633 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 EFTUD2Q15029 972 aaKnown RBP eCLIP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HADHQ16836 314 aaKnown RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 VWC2Q2TAL6 325 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 COL28A1Q2UY09 1125 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CCDC152Q4G0S7 254 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FBXO43Q4G163 708 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SPOUT1Q5T280 376 aaKnown RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 AADACL2Q6P093 401 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 METAP1DQ6UB28 335 aaPredicted RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SLC39A5Q6ZMH5 540 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MACC1Q6ZN28 852 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MOB3CQ70IA8 216 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PRSS42Q7Z5A4 293 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 NIPA2Q8N8Q9 360 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 LEMD2Q8NC56 503 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 C2CD4CQ8TF44 421 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HEXDCQ8WVB3 486 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 UBLCP1Q8WVY7 318 aaPredicted RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ITFG2Q969R8 447 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PABPC5Q96DU9 382 aaKnown RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 EPSTI1Q96J88 318 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 AGAP3Q96P47 875 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 NUDCD1Q96RS6 583 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GATA5Q9BWX5 397 aaPredicted RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CADM1Q9BY67 442 aaKnown RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RAB33BQ9H082 229 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DDX47Q9H0S4 455 aaKnown RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 WNT5BQ9H1J7 359 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CARD9Q9H257 536 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PLEKHA4Q9H4M7 779 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 EHD1Q9H4M9 534 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FARSBQ9NSD9 589 aaKnown RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HACL1Q9UJ83 578 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DNPEPQ9ULA0 475 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DLGAP4Q9Y2H0 992 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FAM96BQ9Y3D0 163 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 UBE4BO95155 1302 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SPEF2Q9C093 1822 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TTC3P53804 2025 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 A0A0B4J293 547 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TRIM49BA6NDI0 452 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 NCF1BA6NI72 391 aaPredicted RBP4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 NCF1CA8MVU1 366 aaPredicted RBP4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TTC34A8MYJ7 566 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CASC3O15234 703 aaKnown RBP4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 POLR2DO15514 142 aaKnown RBP4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SMAD6O43541 496 aaKnown RBP4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZNF821O75541 412 aaPredicted RBP4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MTRF1O75570 445 aaKnown RBP4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CIB2O75838 187 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZWINTO95229 277 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CBX6O95503 412 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SERPINC1P01008 464 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CD63P08962 238 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 POLR2MP0CAP2 368 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CDH3P22223 829 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CALB2P22676 271 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DNASE1P24855 282 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ALDH4A1P30038 563 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SLC8A1P32418 973 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 WNT5AP41221 380 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 STAT6P42226 847 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PTGER3P43115 390 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RFX5P48382 616 aaPredicted RBP4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CENPAP49450 140 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 AGTR2P50052 363 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CLCN3P51790 818 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 METAP1P53582 386 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ARSFP54793 590 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PRRX1P54821 245 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GAD2Q05329 585 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PLD1Q13393 1074 aa4.11□□□□□ -1.75
PDLIM1P4-201ENST00000504327 KRT33BQ14525 404 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms