RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 ALDH18A1P54886 795 aaKnown RBP17.48■□□□□ 0.39
DDR1-252ENST00000504152 YBX1P67809 324 aaKnown RBP17.48■□□□□ 0.39
DDR1-252ENST00000504152 SLC18A2Q05940 514 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 CYP4F3Q08477 520 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 TUBB3Q13509 450 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 ZIC1Q15915 447 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 PFKFB4Q16877 469 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 C18orf21Q32NC0 220 aaPredicted RBP17.48■□□□□ 0.39
DDR1-252ENST00000504152 CDHR3Q6ZTQ4 885 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 TRABD2AQ86V40 505 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 PPP1R3BQ86XI6 285 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 KLHDC8AQ8IYD2 350 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 DNAJC22Q8N4W6 341 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 OR8K5Q8NH50 307 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 PRAP1Q96NZ9 151 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 TEFMQ96QE5 360 aaKnown RBP17.48■□□□□ 0.39
DDR1-252ENST00000504152 PLCD4Q9BRC7 762 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 CD244Q9BZW8 370 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 CENPHQ9H3R5 247 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 FAM60AQ9NP50 221 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 CPSF2Q9P2I0 782 aaKnown RBP17.48■□□□□ 0.39
DDR1-252ENST00000504152 XPR1Q9UBH6 696 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 PCDHGA3Q9Y5H0 932 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 TNPO3Q9Y5L0 923 aaKnown RBP17.48■□□□□ 0.39
DDR1-252ENST00000504152 ZFHX4Q86UP3 3567 aa17.48■□□□□ 0.39
DDR1-252ENST00000504152 SNRNP200O75643 2136 aaKnown RBP17.47■□□□□ 0.39
DDR1-252ENST00000504152 BRINP1O60477 761 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 CCNT2O60583 730 aaKnown RBP17.47■□□□□ 0.39
DDR1-252ENST00000504152 FGF5P12034 268 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 ERVPABLB-1P60509 514 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 RELAQ04206 551 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 CASP8Q14790 479 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 GPR19Q15760 415 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 C16orf46Q6P387 395 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 FBXO42Q6P3S6 717 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 ADCK2Q7Z695 626 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 MCATQ8IVS2 390 aaKnown RBP17.47■□□□□ 0.39
DDR1-252ENST00000504152 C4orf33Q8N1A6 199 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 ESAMQ96AP7 390 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 ZNF578Q96N58 590 aaPredicted RBP17.47■□□□□ 0.39
DDR1-252ENST00000504152 FCRL4Q96PJ5 515 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 OR4K3Q96R72 315 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 SMC6Q96SB8 1091 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 RUFY1Q96T51 708 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 CTRCQ99895 268 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 SLC6A20Q9NP91 592 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 THSD1Q9NS62 852 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 DNAJC11Q9NVH1 559 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 SENP1Q9P0U3 644 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 PLCL2Q9UPR0 1127 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 PCDHGA7Q9Y5G6 932 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 CHD6Q8TD26 2715 aa17.47■□□□□ 0.39
DDR1-252ENST00000504152 IGKV1-8A0A0C4DH67 115 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 KLK8O60259 260 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 SRPX2O60687 465 aaPredicted RBP17.46■□□□□ 0.39
DDR1-252ENST00000504152 H2AFYO75367 372 aaKnown RBP17.46■□□□□ 0.39
DDR1-252ENST00000504152 H2AFXP16104 143 aaPredicted RBP17.46■□□□□ 0.39
DDR1-252ENST00000504152 GNAZP19086 355 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 SLC5A2P31639 672 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 GRK3P35626 688 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 CCR8P51685 355 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 SETDB1Q15047 1291 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 CCDC153Q494R4 210 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 FBXO48Q5FWF7 155 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 ZNF425Q6IV72 752 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 PAQR7Q86WK9 346 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 SRRM1Q8IYB3 904 aaKnown RBP17.46■□□□□ 0.39
DDR1-252ENST00000504152 GPR135Q8IZ08 494 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 TMEM151AQ8N4L1 468 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 SLC5A11Q8WWX8 675 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 ZNF501Q96CX3 271 aaPredicted RBP17.46■□□□□ 0.39
DDR1-252ENST00000504152 TMEM79Q9BSE2 394 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 IQCGQ9H095 443 aaKnown RBP17.46■□□□□ 0.39
DDR1-252ENST00000504152 CCDC86Q9H6F5 360 aaKnown RBP17.46■□□□□ 0.39
DDR1-252ENST00000504152 APMAPQ9HDC9 416 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 CUEDC1Q9NWM3 386 aaPredicted RBP17.46■□□□□ 0.39
DDR1-252ENST00000504152 GPRC5BQ9NZH0 403 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 B3GALT1Q9Y5Z6 326 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 CACNA1GO43497 2377 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 USP24Q9UPU5 2620 aa17.46■□□□□ 0.39
DDR1-252ENST00000504152 OR2A25A4D2G3 310 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 GOLGA6L10A6NI86 522 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 CDRT15L2A8MXV6 281 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 TMEM150CB9EJG8 249 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 C9orf172C9J069 976 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 K7EPI3 171 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 TK2O00142 265 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 CLGNO14967 610 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 MYZAPP0CAP1 466 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 CDH1P12830 882 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 EZRP15311 586 aaKnown RBP17.45■□□□□ 0.38
DDR1-252ENST00000504152 AGTR2P50052 363 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 CDC16Q13042 620 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.45■□□□□ 0.38
DDR1-252ENST00000504152 METTL2BQ6P1Q9 378 aaKnown RBP17.45■□□□□ 0.38
DDR1-252ENST00000504152 LRRC70Q7Z2Q7 622 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 HDXQ7Z353 690 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 SNX31Q8N9S9 440 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 ABHD11Q8NFV4 315 aa17.45■□□□□ 0.38
DDR1-252ENST00000504152 GATA6Q92908 595 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms