RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 IL24Q13007 206 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 TPGS2Q68CL5 300 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 FAM151BQ6UXP7 276 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 C17orf107Q6ZR85 190 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ASPGQ86U10 573 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF546Q86UE3 836 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 MMGT1Q8N4V1 131 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF383Q8NA42 475 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 SUN3Q8TAQ9 357 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 SH3RF3Q8TEJ3 882 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 BPIFA2Q96DR5 249 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ZHX1-C8orf76Q96EF9 292 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 DHRS4Q9BTZ2 278 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 MRI1Q9BV20 369 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ALX4Q9H161 411 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 C3orf14Q9HBI5 128 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 FBXO8Q9NRD0 319 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 SETD1BQ9UPS6 1966 aaKnown RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ANKDD1BA6NHY2 528 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 USP17L5A8MUK1 530 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 A8MXE2 369 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SLC16A6O15403 523 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SIAH2O43255 324 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TLX3O43711 291 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SHBGP04278 402 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SERPIND1P05546 499 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 LIPFP07098 398 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ICAM2P13598 275 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 DPEP1P16444 411 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ELK4P28324 431 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 GRIA3P42263 894 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 MFAP4P55083 255 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TLE2Q04725 743 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SLC18A2Q05940 514 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 CLEC12AQ5QGZ9 265 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 DMRTA1Q5VZB9 504 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 RANBP10Q6VN20 620 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 KCTD9Q7L273 389 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TRABD2AQ86V40 505 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 FRMD1Q8N878 549 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ACTRT2Q8TDY3 377 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 L3HYPDHQ96EM0 354 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 GFM1Q96RP9 751 aaKnown RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 NEURL2Q9BR09 285 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 NXF3Q9H4D5 531 aaKnown RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 PRDM8Q9NQV8 689 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SH3BP4Q9P0V3 963 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 GMPR2Q9P2T1 348 aaKnown RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 KCNK7Q9Y2U2 307 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 MFHAS1Q9Y4C4 1052 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 GPR45Q9Y5Y3 372 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 CAMSAP1Q5T5Y3 1602 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 EMSYQ7Z589 1322 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 M0R143 59 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 PPM1DO15297 605 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 FOXN1O15353 648 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 MAGEB2O15479 319 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 JMJD7P0C870 316 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 PRPS1L1P21108 318 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TIE1P35590 1138 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 CSNK1DP48730 415 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 NHLH2Q02577 135 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SLC18A3Q16572 532 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 VMACQ2NL98 169 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 PTCHD3Q3KNS1 767 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF789Q5FWF6 425 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 PIP5KL1Q5T9C9 394 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 RAET1LQ5VY80 246 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 MOB2Q70IA6 237 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 NIPA1Q7RTP0 329 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 NLGN4XQ8N0W4 816 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ENDOVQ8N8Q3 282 aaKnown RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 MFSD2AQ8NA29 543 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TMEM145Q8NBT3 493 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ZDHHC1Q8WTX9 485 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 RAB2BQ8WUD1 216 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 RHOVQ96L33 236 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 WDR55Q9H6Y2 383 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 METTL7AQ9H8H3 244 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 RAB9BQ9NP90 201 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 GSN-AS1Q9NRJ2 163 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 MTCH1Q9NZJ7 389 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 PCDHA7Q9UN72 937 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 CPQQ9Y646 472 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 KNDC1Q76NI1 1749 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ANKARQ7Z5J8 1434 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 A0A087X0B3 334 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 PRAMEF1O95521 474 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 ACLYP53396 1101 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TEKQ02763 1124 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 VAMP3Q15836 100 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 MEP1AQ16819 746 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SV2CQ496J9 727 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 HSF5Q4G112 596 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TEX30Q5JUR7 227 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 TTC23Q5W5X9 447 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 OVOS1Q6IE37 1185 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 SCIMPQ6UWF3 145 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 WDR88Q6ZMY6 472 aa6.1□□□□□ -1.43
CLCN3-204ENST00000504131 NAA40Q86UY6 237 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms