RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ERI3O43414 337 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 H1F0P07305 194 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 FPGSQ05932 587 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 PDCD4Q53EL6 469 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 NUP188Q5SRE5 1749 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 PAMR1Q6UXH9 720 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 CLIP4Q8N3C7 705 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 CTPS2Q9NRF8 586 aa16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 NLE1Q9NVX2 485 aaPredicted RBP16.11■□□□□ 0.17
PCDHA1-203ENST00000504120 A0A0G2JN53 185 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 ELOA3DA6NLF2 546 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 DCLK1O15075 740 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 FSHRP23945 695 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 CSTF2P33240 577 aaKnown RBP eCLIP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 EMX2Q04743 252 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 ELOA3BQ3SY89 546 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 ZBED5Q49AG3 693 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 SIAH1Q8IUQ4 282 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 ELOA3Q8NG57 546 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 SRRDQ9UH36 339 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 SPIN1Q9Y657 262 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 OAS1P00973 400 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 F7P08709 466 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 AHCYP23526 432 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 CCNHP51946 323 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 CASP9P55211 416 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 UFM1P61960 85 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 JAG1P78504 1218 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 ARF5P84085 180 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 RHDQ02161 417 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 GHRHRQ02643 423 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 IDNKQ5T6J7 187 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 IQCHQ86VS3 1027 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 IFNLR1Q8IU57 520 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 STON2Q8WXE9 905 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 C1orf74Q96LT6 269 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 CDC14AQ9UNH5 594 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 TRBC2A0A5B9 178 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 HCRTO43612 131 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 RBMXL2O75526 392 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 POP7O75817 140 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 GBX2P52951 348 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 RPP38P78345 283 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 ABHD18Q0P651 414 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 QSOX2Q6ZRP7 698 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 OVCA2Q8WZ82 227 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 SLC39A3Q9BRY0 314 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 LGR4Q9BXB1 951 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 ZNF395Q9H8N7 513 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 VRTNQ9H8Y1 702 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 ATP4BP51164 291 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 CLCNKAP51800 687 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 GPM6BQ13491 265 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 LRRC66Q68CR7 880 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 ERI1Q8IV48 349 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 CYB5D2Q8WUJ1 264 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 AUTS2Q8WXX7 1259 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 KCNJ9Q92806 393 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 PMEPA1Q969W9 287 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 CNDP2Q96KP4 475 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 GIN1Q9NXP7 522 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 ABI3Q9P2A4 366 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 MTMR11A4FU01 709 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 SLC11A1P49279 550 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 CDK6Q00534 326 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 TLR1Q15399 786 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 FBXO43Q4G163 708 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 C22orf39Q6P5X5 142 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 PHTF2Q8N3S3 785 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 ZNF527Q8NB42 609 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 MINDY2Q8NBR6 621 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 MAPKAP1Q9BPZ7 522 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 NEUROD4Q9HD90 331 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 CRTAC1Q9NQ79 661 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 TDP1Q9NUW8 608 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 TAC3Q9UHF0 121 aa16.1■□□□□ 0.17
PCDHA1-203ENST00000504120 PDLIM1O00151 329 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 ARCN1P48444 511 aaKnown RBP16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 OR2AJ1Q8NGZ0 328 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 ZNF461Q8TAF7 563 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 BORCS6Q96GS4 357 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 PYURFQ96I23 114 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 FAM210AQ96ND0 272 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 KCNC2Q96PR1 638 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 TRMT61BQ9BVS5 477 aaKnown RBP16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 RIMKLBQ9ULI2 386 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 KCTD3Q9Y597 815 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 BCAS2O75934 225 aaPredicted RBP16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 SLC6A4P31645 630 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 PGBD2Q6P3X8 592 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 ERMP1Q7Z2K6 904 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 OR6K6Q8NGW6 343 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 OR5AK3PQ8NH89 298 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 TSGA13Q96PP4 275 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 C11orf49Q9H6J7 331 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 NDUFS4O43181 175 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 TACSTD2P09758 323 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 G6PDP11413 515 aa16.09■□□□□ 0.17
PCDHA1-203ENST00000504120 ZNF3P17036 446 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms