RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 UCK2Q9BZX2 261 aa14.98□□□□□ -0.01
PDLIM7-210ENST00000503827 KCNK13Q9HB14 408 aa14.98□□□□□ -0.01
PDLIM7-210ENST00000503827 RNF6Q9Y252 685 aa14.98□□□□□ -0.01
PDLIM7-210ENST00000503827 PHF3Q92576 2039 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 HACD1B0YJ81 288 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 SEC24DO94855 1032 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 SUN1O94901 812 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 TPOP07202 933 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 SP1P08047 785 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 ZNF24P17028 368 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 DNASE1P24855 282 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 SLC26A3P40879 764 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 CSE1LP55060 971 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 OC90Q02509 493 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 FASTKQ14296 549 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 GRB7Q14451 532 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 PRPSAP1Q14558 356 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 PRTGQ2VWP7 1150 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 PLAG1Q6DJT9 500 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 MICALCLQ6ZW33 695 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 RNF44Q7L0R7 432 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 CLYBLQ8N0X4 340 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 CFAP61Q8NHU2 1237 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 FAM57AQ8TBR7 257 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 NANOS1Q8WY41 292 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 RND1Q92730 232 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 HDAC10Q969S8 669 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 QKIQ96PU8 341 aaKnown RBP eCLIP14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 MIPEPQ99797 713 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 GORASP1Q9BQQ3 440 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 RAB11FIP5Q9BXF6 653 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 NLE1Q9NVX2 485 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 IMPACTQ9P2X3 320 aa14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 FEZ2Q9UHY8 353 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 FLNAP21333 2647 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-210ENST00000503827 F8W8V4 182 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 TNNT1P13805 278 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 PTGS2P35354 604 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 CDKN2BP42772 138 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 SKOR2Q2VWA4 1001 aaPredicted RBP14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 SLC25A25Q6KCM7 469 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 TTC23LQ6PF05 361 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 UNC5DQ6UXZ4 953 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 PACS1Q6VY07 963 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 Q71RC1 249 aaPredicted RBP14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 FGD2Q7Z6J4 655 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 CD163Q86VB7 1156 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 CRLF3Q8IUI8 442 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 SLC22A15Q8IZD6 547 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 MARVELD2Q8N4S9 558 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 AMER3Q8N944 861 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 CDKN2AIPNLQ96HQ2 116 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 ALPK1Q96QP1 1244 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 ZFYVE21Q9BQ24 234 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 PACSIN1Q9BY11 444 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 POLDIP3Q9BY77 421 aaKnown RBP14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 C19orf25Q9UFG5 118 aaPredicted RBP14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 NENFQ9UMX5 172 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 KLK4Q9Y5K2 254 aa14.96□□□□□ -0.01
PDLIM7-210ENST00000503827 AKAP6Q13023 2319 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 A0A1B0GTH6 734 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 PSMB5P28074 263 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 ST13P50502 369 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 ADAM8P78325 824 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 HSPA14Q0VDF9 509 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 NAA25Q14CX7 972 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 MAPKAPK3Q16644 382 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 CPEB2Q7Z5Q1 589 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 ZC3H7AQ8IWR0 971 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 RAB42Q8N4Z0 105 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 OR2L3Q8NG85 312 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 LRRC45Q96CN5 670 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 HAUS1Q96CS2 278 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 NAP1L5Q96NT1 182 aaPredicted RBP14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 TBL1YQ9BQ87 522 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 FERMT1Q9BQL6 677 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 ANP32EQ9BTT0 268 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 LIME1Q9H400 295 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 GNPTGQ9UJJ9 305 aa14.95□□□□□ -0.02
PDLIM7-210ENST00000503827 IGHV3-20A0A0C4DH32 117 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 FAM237BA0A1B0GVD1 139 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 GABRR3A8MPY1 467 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 H0YGG7 62 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 NRP2O60462 931 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 VPS26AO75436 327 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 CTAG2O75638 210 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 PSMB4P28070 264 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 RBL1P28749 1068 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 PTGER1P34995 402 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 ARF3P61204 181 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 ZBED6P86452 979 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 SYT16Q17RD7 645 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 GARNL3Q5VVW2 1013 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 DENND5AQ6IQ26 1287 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 VRK3Q8IV63 474 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 SLC35G2Q8TBE7 412 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 STYXQ8WUJ0 223 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 RMND5BQ96G75 393 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 ALS2CR12Q96Q35 445 aa14.94□□□□□ -0.02
PDLIM7-210ENST00000503827 MDFIQ99750 246 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms