RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 COL8A1P27658 744 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 CARSP49589 748 aaKnown RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 KLC1Q07866 573 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 THOC5Q13769 683 aaKnown RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 FASTKQ14296 549 aaKnown RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 NAA25Q14CX7 972 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 KCTD19Q17RG1 926 aaPredicted RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 KLHL38Q2WGJ6 581 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 MSS51Q4VC12 460 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 CTSL3PQ5NE16 218 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 THEMIS2Q5TEJ8 643 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 PRMT9Q6P2P2 845 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 LRRC8BQ6P9F7 803 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 DRICH1Q6PGQ1 229 aaPredicted RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 MAMDC2Q7Z304 686 aaPredicted RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 ADCK2Q7Z695 626 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 OR11G2Q8NGC1 345 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 OR2A1Q8NGT9 310 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 OR9A1PQ8NGU1 263 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 STT3BQ8TCJ2 826 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 TCF12Q99081 682 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 ZFYVE21Q9BQ24 234 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 KIFC1Q9BW19 673 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 CCDC68Q9H2F9 335 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 ZNF160Q9HCG1 818 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 MRPS30Q9NP92 439 aaKnown RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 FAM114A2Q9NRY5 505 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 HOMER3Q9NSC5 361 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 UTP6Q9NYH9 597 aaKnown RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 SPATA7Q9P0W8 599 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 ZNF282Q9UDV7 671 aaPredicted RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 ERRFI1Q9UJM3 462 aaPredicted RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 C3orf18Q9UK00 162 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 CDC14AQ9UNH5 594 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 NOVA2Q9UNW9 492 aaKnown RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 NTNG1Q9Y2I2 539 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 ZKSCAN5Q9Y2L8 839 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 CSAG2Q9Y5P2 127 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 HEATR5BQ9P2D3 2071 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 FITM1A5D6W6 292 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 PRPF4O43172 522 aaKnown RBP eCLIP10.23□□□□□ -0.77
SNCA-207ENST00000502987 AVILO75366 819 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 WFS1O76024 890 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 ONECUT2O95948 504 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 CATP04040 527 aaKnown RBP10.23□□□□□ -0.77
SNCA-207ENST00000502987 HEXBP07686 556 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 ANXA5P08758 320 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 PKMP14618 531 aaKnown RBP10.23□□□□□ -0.77
SNCA-207ENST00000502987 CXCR5P32302 372 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 EMP2P54851 167 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 YBX1P67809 324 aaKnown RBP10.23□□□□□ -0.77
SNCA-207ENST00000502987 CDK16Q00536 496 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 GPS1Q13098 491 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 ZNF169Q14929 603 aaPredicted RBP10.23□□□□□ -0.77
SNCA-207ENST00000502987 SIX1Q15475 284 aaPredicted RBP10.23□□□□□ -0.77
SNCA-207ENST00000502987 ACSBG2Q5FVE4 666 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 VWA2Q5GFL6 755 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 FAAH2Q6GMR7 532 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 FBXO42Q6P3S6 717 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 ISLR2Q6UXK2 745 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 ZGRF1Q86YA3 2104 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 OR1N1Q8NGS0 311 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 HMGCLL1Q8TB92 370 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 GRHL3Q8TE85 626 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 PPP4R1Q8TF05 950 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 COG1Q8WTW3 980 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 SMPDL3AQ92484 453 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 RERGQ96A58 199 aaPredicted RBP10.23□□□□□ -0.77
SNCA-207ENST00000502987 C8orf44Q96CB5 159 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 MMABQ96EY8 250 aaPredicted RBP10.23□□□□□ -0.77
SNCA-207ENST00000502987 MAGEB10Q96LZ2 347 aaPredicted RBP10.23□□□□□ -0.77
SNCA-207ENST00000502987 ZNF285Q96NJ3 590 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 BIRC8Q96P09 236 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 TRPC4Q9UBN4 977 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 SOX13Q9UN79 622 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 OSGIN2Q9Y236 505 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 SVILO95425 2214 aa10.23□□□□□ -0.77
SNCA-207ENST00000502987 ITPR2Q14571 2701 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 NSG1A0A0A6YYJ2 146 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 A0A1W2PPV9 198 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 TCRBV7S3A2A0A539 114 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 DYTNA2CJ06 578 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 VSTM2BA6NLU5 285 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 ZNF839A8K0R7 811 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 H0YGG7 62 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 FFAR3O14843 346 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 GPR42O15529 346 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 NRP2O60462 931 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 USP1O94782 785 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 CCNDBP1O95273 360 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 MATN4O95460 622 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 HPP00738 406 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 LDLRP01130 860 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 CCDC175P0C221 793 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 TPSB2P20231 275 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 HSD17B2P37059 387 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 SMCPP49901 116 aaPredicted RBP10.22□□□□□ -0.77
SNCA-207ENST00000502987 PNLIPRP1P54315 467 aa10.22□□□□□ -0.77
SNCA-207ENST00000502987 ARF3P61204 181 aaPredicted RBP10.22□□□□□ -0.77
SNCA-207ENST00000502987 ARG2P78540 354 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms