RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 DAZAP1Q96EP5 407 aaKnown RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 Q96MF0 132 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 FAM111AQ96PZ2 611 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 IWS1Q96ST2 819 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 SIN3AQ96ST3 1273 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 NTPCRQ9BSD7 190 aaKnown RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 GOLPH3LQ9H4A5 285 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 C17orf75Q9HAS0 396 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 PNRC2Q9NPJ4 139 aaKnown RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMEM9BQ9NQ34 198 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC2A4RGQ9NR83 387 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 PARPBPQ9NWS1 579 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 MCM9Q9NXL9 1143 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPG21Q9NZD8 308 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 ARMCX3Q9UH62 379 aaPredicted RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 MAD2L2Q9UI95 211 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 TENM1Q9UKZ4 2725 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 UBE4BO95155 1302 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 TANC1Q9C0D5 1861 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 KIR2DS5A0A0G2JLQ3 304 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ELOVL7A1L3X0 281 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 CXorf65A6NEN9 183 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 LINC00473A8K010 186 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 AKR1B15C9JRZ8 316 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 KIR2DS3K7RE56 304 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 M0QZ24 198 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 SNAP23O00161 211 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 HSPB6O14558 160 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZBTB43O43298 467 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TLX3O43711 291 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 SELENOFO60613 162 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 FCGR3BO75015 233 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 CNOT3O75175 753 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 STAM2O75886 525 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 JTBO76095 146 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 SOX30O94993 753 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 GH1P01241 217 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 KRT6BP04259 564 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 INHBAP08476 426 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ABHD2P08910 425 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 PLA2G4BP0C869 781 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 CYP2D6P10635 497 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 SFTPCP11686 197 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 KRT3P12035 628 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ENO3P13929 434 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TCF4P15884 667 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 EPCAMP16422 314 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 NDUFB7P17568 137 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ITIH1P19827 911 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 GNLYP22749 145 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 AHCYP23526 432 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TACR3P29371 465 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC6A6P31641 620 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 PTGS2P35354 604 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 APOBEC1P41238 236 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 CDX1P47902 265 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ME1P48163 572 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 KRT6CP48668 564 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF75DP51815 510 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ARFIP1P53367 373 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 MFAP3P55082 362 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TNK1Q13470 666 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TSTA3Q13630 321 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 DPYSQ14117 519 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 KPNB1Q14974 876 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 NONOQ15233 471 aaKnown RBP eCLIP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 STXBP2Q15833 593 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 PFKFB3Q16875 520 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 FAM98BQ52LJ0 330 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ARL13AQ5H913 290 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 EARS2Q5JPH6 523 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 PCID2Q5JVF3 399 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 RNASEH2BQ5TBB1 312 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 GGNBP1Q5YKI7 109 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ETFRF1Q6IPR1 90 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 LRRC8EQ6NSJ5 796 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 CDC42EP5Q6NZY7 148 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMEM65Q6PI78 240 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 CASC1Q6TDU7 716 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPNS3Q6ZMD2 512 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 MEX3BQ6ZN04 569 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMEM182Q6ZP80 229 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF534Q76KX8 674 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 KCTD9Q7L273 389 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 DET1Q7L5Y6 550 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF410Q86VK4 478 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 LRRC56Q8IYG6 542 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC25A41Q8N5S1 370 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ANKRD20A12PQ8NF67 263 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 OR1J2Q8NGS2 313 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 FEZF2Q8TBJ5 459 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TAAR8Q969N4 342 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLAMF9Q96A28 289 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ERLEC1Q96DZ1 483 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 VCPIP1Q96JH7 1222 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 CCDC17Q96LX7 622 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 NLRP4Q96MN2 994 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 RUNDC3BQ96NL0 473 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 RUFY1Q96T51 708 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms