RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 VHLP40337 213 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TMPOP42166 694 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 CASP3P42574 277 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ENTPD1P49961 510 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TPMTP51580 245 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 AKR1D1P51857 326 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 DGKEP52429 567 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SMSP52788 366 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 HERVK_113P62684 666 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 PUDPQ08623 228 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC39A6Q13433 755 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 CAPSQ13938 189 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MFSD13AQ14CX5 517 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ME3Q16798 604 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 FASTKD1Q53R41 847 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TTC38Q5R3I4 469 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SPATA46Q5T0L3 261 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 LRRC38Q5VT99 294 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ELP2Q6IA86 826 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TMEM270Q6UE05 265 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 WASH2PQ6VEQ5 465 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 COLCA1Q6ZS62 124 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 H1FNTQ75WM6 255 aaPredicted RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 KCNK18Q7Z418 384 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SPRED1Q7Z699 444 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 CYP4Z1Q86W10 505 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 LINC00346Q8IVM7 164 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM185AQ8N0U4 392 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ADSSL1Q8N142 457 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 GPR137CQ8N3F9 429 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ENDOVQ8N8Q3 282 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 IL17RCQ8NAC3 791 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 POGLUT1Q8NBL1 392 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 BEST2Q8NFU1 509 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 OR10H5Q8NGA6 315 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 OR5H6Q8NGV6 325 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 NDNFQ8TB73 568 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 CPT1CQ8TCG5 803 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF398Q8TD17 642 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TSEN15Q8WW01 171 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MR1Q95460 341 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RAB24Q969Q5 203 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM162AQ96A26 154 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 EXOSC8Q96B26 276 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 S100PBPQ96BU1 408 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MRPL38Q96DV4 380 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ELP4Q96EB1 424 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 CCDC51Q96ER9 411 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 LRRC46Q96FV0 321 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RAB3IPQ96QF0 476 aaPredicted RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SNX18Q96RF0 628 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TWNKQ96RR1 684 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SMOQ99835 787 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 APOL2Q9BQE5 337 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SSBP3Q9BWW4 388 aaPredicted RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ZMYND12Q9H0C1 365 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TMEM117Q9H0C3 514 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 PPA2Q9H2U2 334 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 GAL3ST2Q9H3Q3 398 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 SLA2Q9H6Q3 261 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RANBP3Q9H6Z4 567 aaPredicted RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 METTL7AQ9H8H3 244 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 NGBQ9NPG2 151 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 PCDHB16Q9NRJ7 776 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 CYP39A1Q9NYL5 469 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 NCDNQ9UBB6 729 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 MORF4L1Q9UBU8 362 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 BCAP29Q9UHQ4 241 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 ADAM28Q9UKQ2 775 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 TBX20Q9UMR3 447 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 RPL26L1Q9UNX3 145 aaKnown RBP3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 GDAQ9Y2T3 454 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 HYOU1Q9Y4L1 999 aa3.02□□□□□ -1.93
SNRNP48-202ENST00000496946 PLB1Q6P1J6 1458 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 NUP155O75694 1391 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PARD3Q8TEW0 1356 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 KIAA0232Q92628 1395 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM92AA1XBS5 289 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM149AA5PLN7 773 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CCT8L1PA6NM43 557 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SUPT3HB4E1H0 165 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LOC110117498-PIK3R3F6TDL0 507 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF213O14771 459 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC30A4O14863 429 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TFECO14948 347 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PSMD3O43242 534 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SUV39H1O43463 412 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LAMTOR5O43504 91 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SGCEO43556 437 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 AKAP8O43823 692 aaKnown RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 UNC5CO95185 931 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SERPINA3P01011 423 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TGFAP01135 160 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CDK1P06493 297 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PROS1P07225 676 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FBP1P09467 338 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LAMP2P13473 410 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 OR1E1P30953 314 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CXCR5P32302 372 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 RORAP35398 523 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms