RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 KLHDC1Q8N7A1 406 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 KCTD6Q8NC69 237 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 SLC37A3Q8NCC5 494 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 GATAD1Q8WUU5 269 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 OTUB1Q96FW1 271 aaPredicted RBP3.2□□□□□ -1.9
CD46-218ENST00000496723 MUS81Q96NY9 551 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 LPAR4Q99677 370 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 SLC2A11Q9BYW1 496 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 WWTR1Q9GZV5 400 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 ANKEF1Q9NU02 776 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 TBC1D7Q9P0N9 293 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 WDR35Q9P2L0 1181 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 CHKBQ9Y259 395 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 CASTOR2A6NHX0 329 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 O00370 1275 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 AP5Z1O43299 807 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 DIAPH2O60879 1101 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 CSN3P07498 182 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 LDHCP07864 332 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 OR52Z1P0C646 297 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 MYBL1P10243 752 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 PRKAR1AP10644 381 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 GP1BBP13224 206 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 ZNF10P21506 573 aaPredicted RBP3.19□□□□□ -1.9
CD46-218ENST00000496723 UGT1A4P22310 534 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 PRKACGP22612 351 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 CPT2P23786 658 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 EEF1B2P24534 225 aaKnown RBP3.19□□□□□ -1.9
CD46-218ENST00000496723 RAB28P51157 221 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 DNA2P51530 1060 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 CYCSP99999 105 aaKnown RBP3.19□□□□□ -1.9
CD46-218ENST00000496723 MYL7Q01449 175 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 ACSM1Q08AH1 577 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 TRAP1Q12931 704 aaKnown RBP3.19□□□□□ -1.9
CD46-218ENST00000496723 EFTUD2Q15029 972 aaKnown RBP eCLIP3.19□□□□□ -1.93e-53■■■□□ 16
CD46-218ENST00000496723 NPTX1Q15818 432 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 SNAI3Q3KNW1 292 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 C2CD6Q53TS8 623 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 OR4A47Q6IF82 309 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 C16orf54Q6UWD8 224 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 MAML2Q8IZL2 1156 aaPredicted RBP3.19□□□□□ -1.9
CD46-218ENST00000496723 RYBPQ8N488 228 aaPredicted RBP3.19□□□□□ -1.9
CD46-218ENST00000496723 NOA1Q8NC60 698 aaKnown RBP3.19□□□□□ -1.9
CD46-218ENST00000496723 OR7A2PQ8NGA2 310 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 KCNE4Q8WWG9 221 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 ROBO4Q8WZ75 1007 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 HDAC11Q96DB2 347 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 PGAP3Q96FM1 320 aaPredicted RBP3.19□□□□□ -1.9
CD46-218ENST00000496723 SPAG5Q96R06 1193 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 DCTN5Q9BTE1 182 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 SLC7A10Q9NS82 523 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 BCCIPQ9P287 314 aaKnown RBP eCLIP3.19□□□□□ -1.9
CD46-218ENST00000496723 TXNDC16Q9P2K2 825 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 NOTCH2Q04721 2471 aa3.19□□□□□ -1.9
CD46-218ENST00000496723 P4HA2O15460 535 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 TEX28O15482 410 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 RPS6KA5O75582 802 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 IGHEP01854 428 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 EPCAMP16422 314 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 RPL35AP18077 110 aaKnown RBP3.18□□□□□ -1.9
CD46-218ENST00000496723 ACHEP22303 614 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 TSFMP43897 325 aaKnown RBP3.18□□□□□ -1.9
CD46-218ENST00000496723 LIMK1P53667 647 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 XGP55808 180 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 GSCP56915 257 aaPredicted RBP3.18□□□□□ -1.9
CD46-218ENST00000496723 LMO4P61968 165 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 ENPP2Q13822 863 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 MTF1Q14872 753 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 GPR33Q49SQ1 333 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 TAF1BQ53T94 588 aaPredicted RBP3.18□□□□□ -1.9
CD46-218ENST00000496723 LEKR1Q6ZMV7 388 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 RBPMS2Q6ZRY4 209 aaKnown RBP3.18□□□□□ -1.9
CD46-218ENST00000496723 TLK2Q86UE8 772 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 RASGEF1AQ8N9B8 481 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 XXYLT1Q8NBI6 393 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 FAM222BQ8WU58 562 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 PROX1Q92786 737 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 OMA1Q96E52 524 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 MAP3K3Q99759 626 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 EGFL8Q99944 293 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 CENPOQ9BU64 300 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 NYXQ9GZU5 481 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 DNAJC4Q9NNZ3 241 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 GSN-AS1Q9NRJ2 163 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 NUDT4Q9NZJ9 180 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 THEGQ9P2T0 379 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 CSNK1G3Q9Y6M4 447 aa3.18□□□□□ -1.9
CD46-218ENST00000496723 TDRD15B5MCY1 1934 aaKnown RBP3.17□□□□□ -1.9
CD46-218ENST00000496723 ARID2Q68CP9 1835 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 A0A087WUV0 522 aaPredicted RBP3.17□□□□□ -1.9
CD46-218ENST00000496723 TRBV5-5A0A0J9YX44 114 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 URADA6NGE7 173 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 H0YAE9 185 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 SNX3O60493 162 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 ATP6AP2O75787 350 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 GSRP00390 522 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 ATP1B1P05026 303 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 HLA-FP30511 346 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 PPP5CP53041 499 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 IRX6P78412 446 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms