RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 ARHGAP15Q53QZ3 475 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 C6orf141Q5SZD1 244 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 TMEM220Q6QAJ8 160 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 NEK10Q6ZWH5 1172 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 GALNT5Q7Z7M9 940 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 ARL10Q8N8L6 244 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 BTN2A2Q8WVV5 523 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 CLP1Q92989 425 aaKnown RBP10.86□□□□□ -0.67
CHMP3-209ENST00000494623 THAP11Q96EK4 314 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 MRGPRX3Q96LB0 322 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 VNN3Q9NY84 501 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 USE1Q9NZ43 259 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 IL36AQ9UHA7 158 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 MYO1GB0I1T2 1018 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 PTGES3LE9PB15 166 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF701M0R085 212 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 YY2O15391 372 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 AP2A2O94973 939 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 GSTM1P09488 218 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 SYN1P17600 705 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 AGXTP21549 392 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 DCKP27707 260 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 PDHA2P29803 388 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 WNT3P56703 355 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 GSTM4Q03013 218 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 SRSF11Q05519 484 aaKnown RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 CD47Q08722 323 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ACSM2AQ08AH3 577 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 TMEM115Q12893 351 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 EPS8Q12929 822 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 GRIN2CQ14957 1233 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 FGD3Q5JSP0 725 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 RBM48Q5RL73 367 aaKnown RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 HENMT1Q5T8I9 393 aaKnown RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ACSM2BQ68CK6 577 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 FKBP9P1Q75LS8 142 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 RBM23Q86U06 439 aaKnown RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 DCP2Q8IU60 420 aaKnown RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 CHDHQ8NE62 594 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 DDHD1Q8NEL9 900 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 BPIFB6Q8NFQ5 453 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 PJA1Q8NG27 643 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 WDR20Q8TBZ3 569 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 TIFAQ96CG3 184 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 PKP4Q99569 1192 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 BARD1Q99728 777 aaKnown RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 DPH2Q9BQC3 489 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ZSCAN5AQ9BUG6 496 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 STOX2Q9P2F5 926 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 C3orf18Q9UK00 162 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ITM2BQ9Y287 266 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 BTBD3Q9Y2F9 522 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 MAGEB17A8MXT2 336 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 hCG_2039718K7EN88 272 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 PSIP1O75475 530 aaKnown RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 EPN2O95208 641 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 KCNK5O95279 499 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ETHE1O95571 254 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 SLC16A8O95907 504 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 LINC00271P0C7V0 271 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 LAMP1P11279 417 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 TRPC1P48995 793 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ENTPD1P49961 510 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 GALK1P51570 392 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 MTAPQ13126 283 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 DMC1Q14565 340 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 C16orf72Q14CZ0 275 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF697Q5TEC3 545 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 C1orf53Q5VUE5 145 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 HIPK1Q86Z02 1210 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF420Q8TAQ5 688 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ING5Q8WYH8 240 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 HDAC2Q92769 488 aaKnown RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 GLYATL1Q969I3 302 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 AP2M1Q96CW1 435 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 CCDC138Q96M89 665 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 OR4K3Q96R72 315 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 WRAP53Q9BUR4 548 aaKnown RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 FAF1Q9UNN5 650 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ABCG2Q9UNQ0 655 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 SAMD4AQ9UPU9 718 aaKnown RBP10.85□□□□□ -0.67
CHMP3-209ENST00000494623 ORC6Q9Y5N6 252 aa10.85□□□□□ -0.67
CHMP3-209ENST00000494623 NOL3O60936 208 aaKnown RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 SCN2BO60939 215 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 ABCB7O75027 752 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 ATG13O75143 517 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 MYO1DO94832 1006 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 FKBP9O95302 570 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 CATP04040 527 aaKnown RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 EMP3P54852 163 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 DCDC1P59894 354 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 CSTF3Q12996 717 aaKnown RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 KCNC3Q14003 757 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 SKIV2LQ15477 1246 aaKnown RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF805Q5CZA5 627 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 SERPINA11Q86U17 422 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 SPARTQ8N0X7 666 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 LMNTD1Q8N9Z9 388 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 GPR156Q8NFN8 814 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 OR13F1Q8NGS4 319 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms