RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PAF1Q8N7H5 531 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 MSANTD4Q8NCY6 345 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 HCAR2Q8TDS4 363 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 PATE1Q8WXA2 126 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 CENPIQ92674 756 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 CELF6Q96J87 481 aaKnown RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 UBXN10Q96LJ8 280 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 NSMCE3Q96MG7 304 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 PCDHB18PQ96TA0 734 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 C11orf70Q9BRQ4 267 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 FUCA2Q9BTY2 467 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 FAM83DQ9H4H8 585 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 RETREG1Q9H6L5 497 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 CXorf36Q9H7Y0 433 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 SAMSN1Q9NSI8 373 aaKnown RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 TBCCD1Q9NVR7 557 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 TMEM51Q9NW97 253 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 OCIAD1Q9NX40 245 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 ANKMY1Q9P2S6 941 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 UBA2Q9UBT2 640 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 NOCTQ9UK39 431 aaKnown RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 DTNAQ9Y4J8 743 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 USP9XQ93008 2570 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 LRP4O75096 1905 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 TEX15Q9BXT5 2789 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 A0A0U1RQS6 177 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 CENPVL1A0A0U1RR11 272 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 OR2W5A6NFC9 320 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 UNC119BA6NIH7 251 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 A8MU76 341 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 F8VZ95 297 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 STMND1H3BQB6 276 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 DHHO43323 396 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 PALMO75781 387 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 AGR2O95994 175 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 SLPIP03973 132 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 ELFN1P0C7U0 828 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 PRKAR1AP10644 381 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 UNGP13051 313 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 TPH1P17752 444 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 GM2AP17900 193 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 GPD1P21695 349 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 CSTF2P33240 577 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 UGT1A3P35503 534 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 MMP12P39900 470 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 STAT1P42224 750 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 PTPN9P43378 593 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 CCR10P46092 362 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 GNPDA1P46926 289 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 PAPOLAP51003 745 aaKnown RBP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 SUOXP51687 545 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 POLE2P56282 527 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 YBEYP58557 167 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 RPL7AP62424 266 aaKnown RBP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 BLOC1S1P78537 153 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 CDR2Q01850 454 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 RALGDSQ12967 914 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 PTP4A2Q12974 167 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 LSM12Q3MHD2 195 aaKnown RBP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 RBM20Q5T481 1227 aaKnown RBP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 HIST2H2BCQ6DN03 193 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 CCDC70Q6NSX1 233 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 MRNIPQ6NTE8 343 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 BRAT1Q6PJG6 821 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 SLC30A9Q6PML9 568 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 STRADAQ7RTN6 431 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 NRSN1Q8IZ57 195 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 UMODL1-AS1Q8N2C9 162 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 RTL3Q8N8U3 475 aaKnown RBP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 ZNF564Q8TBZ8 553 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 ART4Q93070 314 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 TMEM159Q96B96 161 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 ZNF641Q96N77 438 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 CTRCQ99895 268 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 SLC39A8Q9C0K1 460 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 GPATCH2LQ9NWQ4 482 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 SLC39A1Q9NY26 324 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 ADAM22Q9P0K1 906 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 AKAP7Q9P0M2 348 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 TMEM9Q9P0T7 183 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 TAAR2Q9P1P5 351 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 PDP2Q9P2J9 529 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 LPAR3Q9UBY5 353 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 FZD10Q9ULW2 581 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 TMEM98Q9Y2Y6 226 aa5.1□□□□□ -1.59
PTCD3-219ENST00000494323 REXO2Q9Y3B8 237 aaKnown RBP5.1□□□□□ -1.59
PTCD3-219ENST00000494323 RELNP78509 3460 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 LOC101059948A0A1B0GTJ6 334 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 A0A1B0GVC2 190 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 TSPAN11A1L157 253 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 AQP7P3A6NL99 342 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 SIGLEC16A6NMB1 481 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 EFCAB7A8K855 629 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 DFFAO00273 331 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 TRAFD1O14545 582 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 EPHB6O15197 1021 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 DUX1O43812 170 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 PRAMEF11O60813 436 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 HOXC4P09017 264 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms