RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 ZNF425Q6IV72 752 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 KIRREL2Q6UWL6 708 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 KCNMB4Q86W47 210 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 HPS6Q86YV9 775 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 PLD3Q8IV08 490 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 LMNTD2Q8IXW0 634 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 CLEC1AQ8NC01 280 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
UFD1-210ENST00000494054 FBXO15Q8NCQ5 510 aaPredicted RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 CALML6Q8TD86 181 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 C19orf60Q96EN9 201 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 PWWP2AQ96N64 755 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 OR2A5Q96R48 311 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 NDNQ99608 321 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 ZFYVE21Q9BQ24 234 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 CCDC68Q9H2F9 335 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 ZNF304Q9HCX3 659 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 MRPS30Q9NP92 439 aaKnown RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 ATP13A2Q9NQ11 1180 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 ABCF3Q9NUQ8 709 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 CUEDC1Q9NWM3 386 aaPredicted RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 C5AR2Q9P296 337 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 ANKMY1Q9P2S6 941 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 ASIC3Q9UHC3 531 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 CDC23Q9UJX2 597 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 FBXL4Q9UKA2 621 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 ADAMTS6Q9UKP5 1117 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 G3BP2Q9UN86 482 aaKnown RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 HS3ST3B1Q9Y662 390 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 RP1L1Q8IWN7 2480 aaPredicted RBP9.3□□□□□ -0.92
UFD1-210ENST00000494054 SMAPO00193 183 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 FFAR3O14843 346 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 GPR42O15529 346 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 ZBTB14O43829 449 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 VPS26AO75436 327 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 SYF2O95926 243 aaKnown RBP9.3□□□□□ -0.92
UFD1-210ENST00000494054 IGHEP01854 428 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 ENO3P13929 434 aaPredicted RBP9.3□□□□□ -0.92
UFD1-210ENST00000494054 IMPA1P29218 277 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 HSD17B2P37059 387 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 SKIV2L2P42285 1042 aaKnown RBP9.3□□□□□ -0.92
UFD1-210ENST00000494054 CARSP49589 748 aaKnown RBP9.3□□□□□ -0.92
UFD1-210ENST00000494054 PGGT1BP53609 377 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 HKDC1Q2TB90 917 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 VWA2Q5GFL6 755 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 RBM20Q5T481 1227 aaKnown RBP9.3□□□□□ -0.92
UFD1-210ENST00000494054 IGFL3Q6UXB1 125 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 UBE2R2Q712K3 238 aaPredicted RBP9.3□□□□□ -0.92
UFD1-210ENST00000494054 LAPTM4BQ86VI4 370 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 PRSS58Q8IYP2 241 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 ARHGEF39Q8N4T4 335 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 FAM26EQ8N5C1 309 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 CSNK1A1LQ8N752 337 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 EFCAB3Q8N7B9 438 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 C2CD4AQ8NCU7 369 aaPredicted RBP9.3□□□□□ -0.92
UFD1-210ENST00000494054 GALNT11Q8NCW6 608 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 STT3BQ8TCJ2 826 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 EEF1AKMT1Q8WVE0 214 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 SLCO2A1Q92959 643 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 PNPLA2Q96AD5 504 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 NACC2Q96BF6 587 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 CABS1Q96KC9 395 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 EBNA1BP2Q99848 306 aaKnown RBP9.3□□□□□ -0.92
UFD1-210ENST00000494054 WDR83Q9BRX9 315 aaKnown RBP9.3□□□□□ -0.92
UFD1-210ENST00000494054 FAM167BQ9BTA0 163 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 SLAMF7Q9NQ25 335 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 SLC17A6Q9P2U8 582 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 PCYOX1Q9UHG3 505 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 RUVBL1Q9Y265 456 aaKnown RBP9.3□□□□□ -0.92
UFD1-210ENST00000494054 COMMD10Q9Y6G5 202 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 SHANK1Q9Y566 2161 aa9.3□□□□□ -0.92
UFD1-210ENST00000494054 PCM1Q15154 2024 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 IGLV3-12A0A075B6K2 115 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 ZNF839A8K0R7 811 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 TCP11X1B4DZS4 312 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 H7BY64 318 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 HAT1O14929 419 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 P2RX6O15547 441 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 VPS4BO75351 444 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 CCNDBP1O95273 360 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 AHSGP02765 367 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 STATHP02808 62 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 ZGLP1P0C6A0 271 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 TCP1P17987 556 aaKnown RBP9.29□□□□□ -0.92
UFD1-210ENST00000494054 FBLP22087 321 aaKnown RBP9.29□□□□□ -0.92
UFD1-210ENST00000494054 ITGA3P26006 1051 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 EMP3P54852 163 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 CDKN2DP55273 166 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 ABATP80404 500 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 KLC1Q07866 573 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 Q0VFX4 171 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 AIMP2Q13155 320 aaKnown RBP9.29□□□□□ -0.92
UFD1-210ENST00000494054 RBBP7Q16576 425 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 ZXDCQ2QGD7 858 aaPredicted RBP9.29□□□□□ -0.92
UFD1-210ENST00000494054 MUM1Q2TAK8 710 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 BBS9Q3SYG4 887 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 SPANXN3Q5MJ09 141 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 HP1BP3Q5SSJ5 553 aaPredicted RBP9.29□□□□□ -0.92
UFD1-210ENST00000494054 PRMT9Q6P2P2 845 aa9.29□□□□□ -0.92
UFD1-210ENST00000494054 PAQR3Q6TCH7 311 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms