RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CNOT10Q9H9A5 744 aaKnown RBP3.36□□□□□ -1.87
SMC4-223ENST00000493695 Q9N2K0 584 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 BCCIPQ9P287 314 aaKnown RBP eCLIP3.36□□□□□ -1.87
SMC4-223ENST00000493695 CFDP1Q9UEE9 299 aaPredicted RBP3.36□□□□□ -1.87
SMC4-223ENST00000493695 A0A1W2PN81 502 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 URADA6NGE7 173 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 CCDC188H7C350 402 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 TRIM77I1YAP6 450 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 TADA2AO75478 443 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 RAB40ALP0C0E4 278 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 LHCGRP22888 699 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 CA6P23280 308 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 MC5RP33032 325 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 CHRNA7P36544 502 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 MTHFRP42898 656 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 ZNF41P51814 821 aaPredicted RBP3.35□□□□□ -1.87
SMC4-223ENST00000493695 TMEM50BP56557 158 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 HSPB3Q12988 150 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 ARMC4Q5T2S8 1044 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 PI4KAP1Q8N8J0 262 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 TRIML1Q8N9V2 468 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 NUP37Q8NFH4 326 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 DHX58Q96C10 678 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 RMDN1Q96DB5 314 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 SPDL1Q96EA4 605 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 ZNF486Q96H40 463 aaPredicted RBP3.35□□□□□ -1.87
SMC4-223ENST00000493695 MUS81Q96NY9 551 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 SLC25A23Q9BV35 468 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 S1PR5Q9H228 398 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 PPANQ9NQ55 473 aaKnown RBP3.35□□□□□ -1.87
SMC4-223ENST00000493695 B3GAT1Q9P2W7 334 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 MTUS1Q9ULD2 1270 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 GRID1Q9ULK0 1009 aa3.35□□□□□ -1.87
SMC4-223ENST00000493695 ABT1Q9ULW3 272 aaKnown RBP3.35□□□□□ -1.87
SMC4-223ENST00000493695 HYKKA2RU49 373 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 C15orf61A6NNL5 157 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 RECQL5O94762 991 aaPredicted RBP3.34□□□□□ -1.87
SMC4-223ENST00000493695 CELF2O95319 508 aaKnown RBP3.34□□□□□ -1.87
SMC4-223ENST00000493695 IGHV2-70P01814 119 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 GP9P14770 177 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 CYP2A7P20853 494 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 MPZP25189 248 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 OXTRP30559 389 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 HLCSP50747 726 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 RAB28P51157 221 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 ZNF75DP51815 510 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 PDX1P52945 283 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 B3GALT5-AS1P59052 145 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 HERV-K104P61576 105 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 CYCSP99999 105 aaKnown RBP3.34□□□□□ -1.87
SMC4-223ENST00000493695 RALGDSQ12967 914 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 SYT14P1Q58G82 188 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 CHST3Q7LGC8 479 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 CCDC186Q7Z3E2 898 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 CENPVQ7Z7K6 275 aaPredicted RBP3.34□□□□□ -1.87
SMC4-223ENST00000493695 SLC47A2Q86VL8 602 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 IQCHQ86VS3 1027 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 NUDT13Q86X67 352 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 FAM114A1Q8IWE2 563 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 CDK20Q8IZL9 346 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 KIRREL3Q8IZU9 778 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 MAPKAPK5-AS1Q8N8E1 139 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 AQP11Q8NBQ7 271 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 NPEPL1Q8NDH3 523 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 C17orf47Q8NEP4 570 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 OR13J1Q8NGT2 312 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 TOMM40LQ969M1 308 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 HDAC11Q96DB2 347 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 RADILQ96JH8 1075 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 CNDP2Q96KP4 475 aaKnown RBP3.34□□□□□ -1.87
SMC4-223ENST00000493695 FNDC11Q9BVV2 318 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 NUP85Q9BW27 656 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 OPA3Q9H6K4 179 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 TBC1D17Q9HA65 648 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 MYNNQ9NPC7 610 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 SDR39U1Q9NRG7 319 aaPredicted RBP3.34□□□□□ -1.87
SMC4-223ENST00000493695 SERINC1Q9NRX5 453 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 DPP3Q9NY33 737 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 PCDH11YQ9BZA8 1340 aa3.34□□□□□ -1.87
SMC4-223ENST00000493695 NEMP2A6NFY4 417 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 GAPDHSO14556 408 aaPredicted RBP3.33□□□□□ -1.88
SMC4-223ENST00000493695 IPO8O15397 1037 aaKnown RBP3.33□□□□□ -1.88
SMC4-223ENST00000493695 SLCO2B1O94956 709 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 MELTFP08582 738 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 CCDC175P0C221 793 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 CYP11B2P19099 503 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 ACHEP22303 614 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 PCGF2P35227 344 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 LEPRP48357 1165 aaKnown RBP3.33□□□□□ -1.88
SMC4-223ENST00000493695 TPD52P55327 224 aaPredicted RBP3.33□□□□□ -1.88
SMC4-223ENST00000493695 CX3CL1P78423 397 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 SQLEQ14534 574 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 COG2Q14746 738 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 HYAL4Q2M3T9 481 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 LETM2Q2VYF4 491 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 XKR3Q5GH77 459 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 C1orf141Q5JVX7 400 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 LYSMD4Q5XG99 296 aa3.33□□□□□ -1.88
SMC4-223ENST00000493695 TMPRSS11BQ86T26 416 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms