RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CYB5D1Q6P9G0 228 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 ADGRD1Q6QNK2 874 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 CENPLQ8N0S6 344 aaPredicted RBP11.15□□□□□ -0.62
CTSA-209ENST00000493522 BMPERQ8N8U9 685 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 OR2L3Q8NG85 312 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 EPS8L3Q8TE67 593 aaKnown RBP11.15□□□□□ -0.62
CTSA-209ENST00000493522 ATL1Q8WXF7 558 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 USP7Q93009 1102 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 ISL2Q96A47 359 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 PTERQ96BW5 349 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 MTBPQ96DY7 904 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 UBXN10Q96LJ8 280 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 TSNARE1Q96NA8 513 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 TAAR9Q96RI9 348 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 TWSG1Q9GZX9 223 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 ATG10Q9H0Y0 220 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 ALG9Q9H6U8 611 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 NMRAL1Q9HBL8 299 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 APMAPQ9HDC9 416 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 PDE7BQ9NP56 450 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 IGSF5Q9NSI5 407 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 PCMTD2Q9NV79 361 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 RNF112Q9ULX5 631 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 KLHL20Q9Y2M5 609 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 PCDHGA4Q9Y5G9 962 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 SUPT3HB4E1H0 165 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 TERTO14746 1132 aaKnown RBP11.14□□□□□ -0.63
CTSA-209ENST00000493522 POLR1CO15160 346 aaPredicted RBP11.14□□□□□ -0.63
CTSA-209ENST00000493522 PRICKLE3O43900 615 aaPredicted RBP11.14□□□□□ -0.63
CTSA-209ENST00000493522 SUPT3HO75486 399 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 ANXA5P08758 320 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 FAM87AP0C7U9 286 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 FOLR1P15328 257 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 SLC26A3P40879 764 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 MC2RQ01718 297 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 ACY1Q03154 408 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 IFFO1Q0D2I5 559 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 SRSF6Q13247 344 aaKnown RBP11.14□□□□□ -0.63
CTSA-209ENST00000493522 NAE1Q13564 534 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 NAA25Q14CX7 972 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 FAM83EQ2M2I3 478 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 DCAF12Q5T6F0 453 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 ICE2Q659A1 982 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 KLC3Q6P597 504 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 CEACAM20Q6UY09 585 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 GPSM1Q86YR5 675 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 LRRC56Q8IYG6 542 aaPredicted RBP11.14□□□□□ -0.63
CTSA-209ENST00000493522 D2HGDHQ8N465 521 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 OR2A1Q8NGT9 310 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 OR2W6PQ8NHA6 318 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 N4BP2L2Q92802 583 aaPredicted RBP11.14□□□□□ -0.63
CTSA-209ENST00000493522 KIAA1191Q96A73 305 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 FBXL8Q96CD0 374 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 NXNL1Q96CM4 212 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 RNF31Q96EP0 1072 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 DDA1Q9BW61 102 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 PPCSQ9HAB8 311 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 SLC6A20Q9NP91 592 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 MRPS30Q9NP92 439 aaKnown RBP11.14□□□□□ -0.63
CTSA-209ENST00000493522 FGF21Q9NSA1 209 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 WWOXQ9NZC7 414 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 CD274Q9NZQ7 290 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 FOXJ2Q9P0K8 574 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 RARRES3Q9UL19 164 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 B3GALT1Q9Y5Z6 326 aa11.14□□□□□ -0.63
CTSA-209ENST00000493522 TMEM150CB9EJG8 249 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 C9orf172C9J069 976 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 KERAO60938 352 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 ERLIN1O75477 346 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 KLHL2O95198 593 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 NUDT17P0C025 328 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 CCND1P24385 295 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 CDKL1Q00532 357 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 TGFBIQ15582 683 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 ZIC1Q15915 447 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 TSNAXIP1Q2TAA8 658 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 CAPN13Q6MZZ7 669 aaPredicted RBP11.13□□□□□ -0.63
CTSA-209ENST00000493522 FIGLAQ6QHK4 219 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 CDHR3Q6ZTQ4 885 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 ADCK2Q7Z695 626 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 VASH2Q86V25 355 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 MREGQ8N565 214 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 STAG3L4Q8TBR4 150 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 PYCR2Q96C36 320 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 TCTN2Q96GX1 697 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 CABS1Q96KC9 395 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 SCYL1Q96KG9 808 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 TEFMQ96QE5 360 aaKnown RBP11.13□□□□□ -0.63
CTSA-209ENST00000493522 DPH7Q9BTV6 452 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 ASPSCR1Q9BZE9 553 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 B3GNT4Q9C0J1 378 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 PCBD2Q9H0N5 130 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 FAM60AQ9NP50 221 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 FBXO8Q9NRD0 319 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 CUEDC1Q9NWM3 386 aaPredicted RBP11.13□□□□□ -0.63
CTSA-209ENST00000493522 IRAK4Q9NWZ3 460 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 NUDT4Q9NZJ9 180 aa11.13□□□□□ -0.63
CTSA-209ENST00000493522 TLDC2A0PJX2 215 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 GOLGA8RI6L899 631 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 UBXN8O00124 270 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms