RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 PCDHA9Q9Y5H5 950 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 A0A087WV48 116 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 OR2AG2A6NM03 316 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 PLOD2O00469 737 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 DENRO43583 198 aaKnown RBP6.81□□□□□ -1.32
HERC4-211ENST00000492996 ULK1O75385 1050 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 TYRP14679 529 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 CD9P21926 228 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 IL10P22301 178 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 PRKACBP22694 351 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 PSMA4P25789 261 aaKnown RBP6.81□□□□□ -1.32
HERC4-211ENST00000492996 CCR7P32248 378 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 MAPK8P45983 427 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 RECQLP46063 649 aaPredicted RBP6.81□□□□□ -1.32
HERC4-211ENST00000492996 CXCL12P48061 93 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 CSNK1DP48730 415 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 RPIAP49247 311 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 B4GALNT1Q00973 533 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 INPP5AQ14642 412 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 Q6ZVL8 140 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 DCP2Q8IU60 420 aaKnown RBP6.81□□□□□ -1.32
HERC4-211ENST00000492996 VRK3Q8IV63 474 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 SLC22A15Q8IZD6 547 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 MARVELD2Q8N4S9 558 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 CBR4Q8N4T8 237 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 KRTCAP2Q8N6L1 136 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 FAM181AQ8N9Y4 354 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 ANKK1Q8NFD2 765 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 RHBDF1Q96CC6 855 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 PDLIM5Q96HC4 596 aaKnown RBP6.81□□□□□ -1.32
HERC4-211ENST00000492996 VPS50Q96JG6 964 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 LRRC3BQ96PB8 259 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 ATG10Q9H0Y0 220 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 ACTL8Q9H568 366 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 ABCD2Q9UBJ2 740 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 SLC25A13Q9UJS0 675 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 RAB26Q9ULW5 256 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 UNC80Q8N2C7 3258 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 FAM234BA2RU67 622 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 WASH3PC4AMC7 463 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 SH3BGRLO75368 114 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 TRMUO75648 421 aaKnown RBP6.81□□□□□ -1.32
HERC4-211ENST00000492996 STK16O75716 305 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 SEC24DO94855 1032 aaPredicted RBP6.81□□□□□ -1.32
HERC4-211ENST00000492996 PABPC1P11940 636 aaKnown RBP6.81□□□□□ -1.32
HERC4-211ENST00000492996 PCNAP12004 261 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 EPB42P16452 691 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 RPS3P23396 243 aaKnown RBP eCLIP6.81□□□□□ -1.328e-6■■□□□ 12.7
HERC4-211ENST00000492996 ITPKAP23677 461 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 NSG1P42857 185 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 CCT8P50990 548 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 RPL26P61254 145 aaKnown RBP6.81□□□□□ -1.32
HERC4-211ENST00000492996 TTLL9Q3SXZ7 439 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 ANKDD1AQ495B1 522 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 CARD16Q5EG05 197 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 FAM209AQ5JX71 171 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 DEPDC1Q5TB30 811 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 PRMT9Q6P2P2 845 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 GRASPQ7Z6J2 395 aaPredicted RBP6.81□□□□□ -1.32
HERC4-211ENST00000492996 CROCCP3Q8IVE0 287 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 RNF175Q8N4F7 328 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 PDPRQ8NCN5 879 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 FOXJ1Q92949 421 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 CD244Q9BZW8 370 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 BRINP2Q9C0B6 783 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 CAAP1Q9H8G2 361 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 ZDHHC3Q9NYG2 299 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 SCHIP1Q9P0W5 487 aaPredicted RBP6.81□□□□□ -1.32
HERC4-211ENST00000492996 OARD1Q9Y530 152 aa6.81□□□□□ -1.32
HERC4-211ENST00000492996 TRBV5-4A0A0C4DH59 114 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 TTC34A8MYJ7 566 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 K7EPI3 171 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 CDK2AP1O14519 115 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 PER2O15055 1255 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 ADAM23O75077 832 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 EEDO75530 441 aaKnown RBP6.8□□□□□ -1.32
HERC4-211ENST00000492996 POP4O95707 220 aaKnown RBP6.8□□□□□ -1.32
HERC4-211ENST00000492996 CLIC3O95833 236 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 ENO2P09104 434 aaPredicted RBP6.8□□□□□ -1.32
HERC4-211ENST00000492996 FAM58BPP0C7Q3 252 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 HSD17B1P14061 328 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 PNLIPP16233 465 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 CDH3P22223 829 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 RCVRNP35243 200 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 MTAPQ13126 283 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 FAM174BQ3ZCQ3 159 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 GPR33Q49SQ1 333 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 KRT80Q6KB66 452 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 MACC1Q6ZN28 852 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 UBE2R2Q712K3 238 aaPredicted RBP6.8□□□□□ -1.32
HERC4-211ENST00000492996 ZFAND4Q86XD8 727 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 RGL4Q8IZJ4 473 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 LIX1Q8N485 282 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 VOPP1Q96AW1 172 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 ZSWIM3Q96MP5 696 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 RNF145Q96MT1 663 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 CGREF1Q99674 301 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 TBCDQ9BTW9 1192 aa6.8□□□□□ -1.32
HERC4-211ENST00000492996 THUMPD3Q9BV44 507 aaKnown RBP6.8□□□□□ -1.32
HERC4-211ENST00000492996 PAIP1Q9H074 479 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms