RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ZCWPW2A0A1B0GU75 182 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 A0A1W2PNU3 283 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 TRABD2BA6NFA1 517 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 H0YJX3 145 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 HNRNPRO43390 633 aaKnown RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CSO75390 466 aaKnown RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CCDC166P0CW27 439 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 ATP1B2P14415 290 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 FASLGP48023 281 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 INHBCP55103 352 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 PKNOX1P55347 436 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 IRF9Q00978 393 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 BCL7AQ4VC05 210 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 ARL13AQ5H913 290 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 C6orf52Q5T4I8 152 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 NKAIN2Q5VXU1 208 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 NXNQ6DKJ4 435 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 UNQ6494/PRO21346Q6UXR6 183 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 B3GNT8Q7Z7M8 397 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 LDB1Q86U70 411 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 KCNMB4Q86W47 210 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CACTIN-AS1Q8N1I8 211 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 EME1Q96AY2 570 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 MFSD3Q96ES6 412 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 VPS39Q96JC1 886 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 PPP1R36Q96LQ0 422 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 PKP2Q99959 881 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 KIFC1Q9BW19 673 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 ZCCHC2Q9C0B9 1178 aaKnown RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 ZNF385DQ9H6B1 395 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CAB39LQ9H9S4 337 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 DDX18Q9NVP1 670 aaKnown RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 NSMCE4AQ9NXX6 385 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 MARCH4Q9P2E8 410 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 ENTPD2Q9Y5L3 495 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CEP295Q9C0D2 2601 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 PMS2P1A4D2B8 440 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 OR52A4PA6NMU1 304 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 RHPN2P1A8MT19 583 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 TK2O00142 265 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 OR1I1O60431 355 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 PFDN1O60925 122 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 ARNTP27540 789 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 CD1CP29017 333 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 ALDH4A1P30038 563 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 SLC19A1P41440 591 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 MS4A2Q01362 244 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 CFHR1Q03591 330 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 DMPKQ09013 629 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 ISXQ2M1V0 245 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 ZNF658BQ4V348 819 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 ABRAXAS1Q6UWZ7 409 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 AMZ2Q86W34 360 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 LILRA2Q8N149 483 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 GALNT4Q8N4A0 578 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 OR4L1Q8NH43 312 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 ASB9Q96DX5 294 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 FAM8A1Q9UBU6 413 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 PCDHGB4Q9UN71 923 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 G3BP2Q9UN86 482 aaKnown RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 PCDHGB5Q9Y5G0 923 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 DNMT3AQ9Y6K1 912 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 AK5Q9Y6K8 562 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 ACOT8O14734 319 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 TRMUO75648 421 aaKnown RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 IDSP22304 550 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 MSX2P35548 267 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 PRLHRP49683 370 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 NAGLUP54802 743 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 UBE2IP63279 158 aaKnown RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 HHEXQ03014 270 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 DCTN2Q13561 401 aaKnown RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 SPIDRQ14159 915 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 MYBPC3Q14896 1274 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 AMZ1Q400G9 498 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 METRNLQ641Q3 311 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 AFTPHQ6ULP2 937 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 ISLR2Q6UXK2 745 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 ZNF574Q6ZN55 896 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 USP53Q70EK8 1073 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 RNF148Q8N7C7 305 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 OR6P1Q8NGX9 317 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 OR2L2Q8NH16 312 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 MIPOL1Q8TD10 442 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 LINC00615Q96LM1 132 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 GFM1Q96RP9 751 aaKnown RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 RDH14Q9HBH5 336 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 SARS2Q9NP81 518 aaKnown RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 C20orf96Q9NUD7 363 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 CHCHD3Q9NX63 227 aaKnown RBP9.12□□□□□ -0.95
BRCA1-219ENST00000491747 CPNE7Q9UBL6 633 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 SLC39A10Q9ULF5 831 aa9.12□□□□□ -0.95
BRCA1-219ENST00000491747 CHD8Q9HCK8 2581 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 FREM2Q5SZK8 3169 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 IGHV1OR21-1A0A087WYE8 117 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 MGAT4DA6NG13 374 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 TRPC5OSA6NMA1 111 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 PDZK1P1A8MUH7 402 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 D6RAR5 112 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 GOLGA8TH3BQL2 631 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms