RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 ZNF839A8K0R7 811 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 PHF2O75151 1096 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 ZGLP1P0C6A0 271 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 RNF224P0DH78 156 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 MLNP12872 115 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 HSD17B2P37059 387 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 ELOAQ14241 798 aaKnown RBP17.53■□□□□ 0.4
SMIM4-205ENST00000491607 ARHGAP19Q14CB8 494 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 HIST2H2BCQ6DN03 193 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 CCDC137Q6PK04 289 aaKnown RBP17.53■□□□□ 0.4
SMIM4-205ENST00000491607 ADCK2Q7Z695 626 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 CSNK1A1LQ8N752 337 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 CNDP1Q96KN2 507 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 C10orf90Q96M02 699 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 SERPINB12Q96P63 405 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 PLCD4Q9BRC7 762 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 MESP1Q9BRJ9 268 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 LHPPQ9H008 270 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 C3orf18Q9UK00 162 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 PCDHGA10Q9Y5H3 936 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 MAD1L1Q9Y6D9 718 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 CCDC88CQ9P219 2028 aa17.53■□□□□ 0.4
SMIM4-205ENST00000491607 A1L4Q6 167 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 MAP2K7O14733 419 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 KIF5CO60282 957 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 CCNDBP1O95273 360 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 CBX6O95503 412 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 SLC16A8O95907 504 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 ACPPP15309 386 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 COILP38432 576 aaPredicted RBP17.52■□□□□ 0.4
SMIM4-205ENST00000491607 SLC1A2P43004 574 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 HKDC1Q2TB90 917 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 VWA2Q5GFL6 755 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 ICE2Q659A1 982 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 NEK10Q6ZWH5 1172 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 SPNS2Q8IVW8 549 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 RASGEF1CQ8N431 466 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 MCUQ8NE86 351 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 GIMAP7Q8NHV1 300 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 DNAJB14Q8TBM8 379 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 PPP4R1Q8TF05 950 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 ZNF480Q8WV37 535 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 RERGQ96A58 199 aaPredicted RBP17.52■□□□□ 0.4
SMIM4-205ENST00000491607 C8orf44Q96CB5 159 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 PBKQ96KB5 322 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 EPS8L2Q9H6S3 715 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 ZNF160Q9HCG1 818 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 C20orf96Q9NUD7 363 aaPredicted RBP17.52■□□□□ 0.4
SMIM4-205ENST00000491607 UTP6Q9NYH9 597 aaKnown RBP17.52■□□□□ 0.4
SMIM4-205ENST00000491607 TRPC4Q9UBN4 977 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 CDC14AQ9UNH5 594 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 NOVA2Q9UNW9 492 aaKnown RBP17.52■□□□□ 0.4
SMIM4-205ENST00000491607 RUVBL1Q9Y265 456 aaKnown RBP17.52■□□□□ 0.4
SMIM4-205ENST00000491607 JRKLQ9Y4A0 524 aa17.52■□□□□ 0.4
SMIM4-205ENST00000491607 SEC16AO15027 2179 aa17.52■□□□□ 0.39
SMIM4-205ENST00000491607 SHANK1Q9Y566 2161 aa17.52■□□□□ 0.39
SMIM4-205ENST00000491607 IGKV1-8A0A0C4DH67 115 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 ZCWPW2A0A1B0GU75 182 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 ANKUB1A6NFN9 424 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 SMAPO00193 183 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 FFAR3O14843 346 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 GPR42O15529 346 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 PRPF4O43172 522 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMIM4-205ENST00000491607 PRDX1Q06830 199 aaKnown RBP17.51■□□□□ 0.39
SMIM4-205ENST00000491607 Q0VFX4 171 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 LONRF1Q17RB8 773 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 PRTGQ2VWP7 1150 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 THEMIS2Q5TEJ8 643 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 NUP210LQ5VU65 1888 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 LINC00696Q6ZRV3 163 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 PAQR7Q86WK9 346 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 KCNJ9Q92806 393 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 MMABQ96EY8 250 aaPredicted RBP17.51■□□□□ 0.39
SMIM4-205ENST00000491607 NAP1L3Q99457 506 aaPredicted RBP17.51■□□□□ 0.39
SMIM4-205ENST00000491607 AGPAT4Q9NRZ5 378 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 PCYOX1Q9UHG3 505 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 NTNG1Q9Y2I2 539 aa17.51■□□□□ 0.39
SMIM4-205ENST00000491607 E7ENX8 843 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 PGRMC1O00264 195 aaKnown RBP17.5■□□□□ 0.39
SMIM4-205ENST00000491607 ZBTB14O43829 449 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 HPP00738 406 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 ANXA5P08758 320 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 MPC1LP0DKB6 136 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 ENO3P13929 434 aaPredicted RBP17.5■□□□□ 0.39
SMIM4-205ENST00000491607 EZRP15311 586 aaKnown RBP17.5■□□□□ 0.39
SMIM4-205ENST00000491607 EMP3P54852 163 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 TAP2Q03519 686 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 CDC16Q13042 620 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 DSG2Q14126 1118 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 CRB2Q5IJ48 1285 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 ZNF549Q6P9A3 640 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 IGFL2Q6UWQ7 119 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 LAPTM4BQ86VI4 370 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 ASB11Q8WXH4 323 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 GPR21Q99679 349 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 SYNPO2LQ9H987 977 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 MED16Q9Y2X0 877 aa17.5■□□□□ 0.39
SMIM4-205ENST00000491607 USP9XQ93008 2570 aaPredicted RBP17.5■□□□□ 0.39
SMIM4-205ENST00000491607 UTP20O75691 2785 aaKnown RBP17.49■□□□□ 0.39
SMIM4-205ENST00000491607 PCM1Q15154 2024 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms