RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 GPR83Q9NYM4 423 aa29.97■■■□□ 2.39
LDB1-204ENST00000490751 TAS2R13Q9NYV9 303 aa29.97■■■□□ 2.39
LDB1-204ENST00000490751 MDC1Q14676 2089 aaKnown RBP29.96■■■□□ 2.39
LDB1-204ENST00000490751 AHSGP02765 367 aa29.96■■■□□ 2.39
LDB1-204ENST00000490751 IMPA1P29218 277 aa29.96■■■□□ 2.39
LDB1-204ENST00000490751 ITGA8P53708 1063 aa29.96■■■□□ 2.39
LDB1-204ENST00000490751 NKG7Q16617 165 aa29.96■■■□□ 2.39
LDB1-204ENST00000490751 ZNF425Q6IV72 752 aa29.96■■■□□ 2.39
LDB1-204ENST00000490751 LRRC56Q8IYG6 542 aaPredicted RBP29.96■■■□□ 2.39
LDB1-204ENST00000490751 EEF1AKMT1Q8WVE0 214 aa29.96■■■□□ 2.39
LDB1-204ENST00000490751 SPSB2Q99619 263 aa29.96■■■□□ 2.39
LDB1-204ENST00000490751 WDR83Q9BRX9 315 aaKnown RBP29.96■■■□□ 2.39
LDB1-204ENST00000490751 SLC26A1Q9H2B4 701 aa29.96■■■□□ 2.39
LDB1-204ENST00000490751 PPANQ9NQ55 473 aaKnown RBP29.96■■■□□ 2.39
LDB1-204ENST00000490751 MAU2Q9Y6X3 613 aa29.96■■■□□ 2.39
LDB1-204ENST00000490751 UBR5O95071 2799 aaPredicted RBP29.96■■■□□ 2.39
LDB1-204ENST00000490751 SPENQ96T58 3664 aaKnown RBP29.95■■■□□ 2.39
LDB1-204ENST00000490751 H0YGG7 62 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 FANCGO15287 622 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 IGHEP01854 428 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 RGS4P49798 205 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 MLLT10P55197 1068 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 CDKN2DP55273 166 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 ARF3P61204 181 aaPredicted RBP29.95■■■□□ 2.39
LDB1-204ENST00000490751 RAPSNQ13702 412 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 HIF1AQ16665 826 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 NADK2Q4G0N4 442 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 DCAF10Q5QP82 559 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 CLEC1AQ8NC01 280 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 TRIM31Q9BZY9 425 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 SYNPO2LQ9H987 977 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 UTP6Q9NYH9 597 aaKnown RBP29.95■■■□□ 2.39
LDB1-204ENST00000490751 STOX2Q9P2F5 926 aaPredicted RBP29.95■■■□□ 2.39
LDB1-204ENST00000490751 CTSFQ9UBX1 484 aa29.95■■■□□ 2.39
LDB1-204ENST00000490751 SEC31AO94979 1220 aaKnown RBP29.94■■■□□ 2.38
LDB1-204ENST00000490751 ABATP80404 500 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 MUM1Q2TAK8 710 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 PRTGQ2VWP7 1150 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 TEDDM1Q5T9Z0 273 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 THEMIS2Q5TEJ8 643 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 TRMT10BQ6PF06 316 aaKnown RBP29.94■■■□□ 2.38
LDB1-204ENST00000490751 PAQR3Q6TCH7 311 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 GALNT7Q86SF2 657 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 LRRC39Q96DD0 335 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 SNF8Q96H20 258 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 C10orf90Q96M02 699 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 SOX17Q9H6I2 414 aaPredicted RBP29.94■■■□□ 2.38
LDB1-204ENST00000490751 ZNF304Q9HCX3 659 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 ADAMTS6Q9UKP5 1117 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 TEX264Q9Y6I9 313 aa29.94■■■□□ 2.38
LDB1-204ENST00000490751 ARL4CP56559 192 aa29.93■■■□□ 2.38
LDB1-204ENST00000490751 STEAP4Q687X5 459 aa29.93■■■□□ 2.38
LDB1-204ENST00000490751 SHISA6Q6ZSJ9 500 aa29.93■■■□□ 2.38
LDB1-204ENST00000490751 ADCK2Q7Z695 626 aa29.93■■■□□ 2.38
LDB1-204ENST00000490751 MYO1HQ8N1T3 1032 aa29.93■■■□□ 2.38
LDB1-204ENST00000490751 CSNK1A1LQ8N752 337 aa29.93■■■□□ 2.38
LDB1-204ENST00000490751 CABS1Q96KC9 395 aa29.93■■■□□ 2.38
LDB1-204ENST00000490751 CUEDC1Q9NWM3 386 aaPredicted RBP29.93■■■□□ 2.38
LDB1-204ENST00000490751 RNF14Q9UBS8 474 aa29.93■■■□□ 2.38
LDB1-204ENST00000490751 CDC23Q9UJX2 597 aa29.93■■■□□ 2.38
LDB1-204ENST00000490751 NXT1Q9UKK6 140 aaKnown RBP29.93■■■□□ 2.38
LDB1-204ENST00000490751 PLAAQ9Y263 795 aa29.93■■■□□ 2.38
LDB1-204ENST00000490751 MASP2O00187 686 aa29.92■■■□□ 2.38
LDB1-204ENST00000490751 C8GP07360 202 aa29.92■■■□□ 2.38
LDB1-204ENST00000490751 MMP11P24347 488 aa29.92■■■□□ 2.38
LDB1-204ENST00000490751 PRMT9Q6P2P2 845 aa29.92■■■□□ 2.38
LDB1-204ENST00000490751 MCOLN3Q8TDD5 553 aa29.92■■■□□ 2.38
LDB1-204ENST00000490751 COL26A1Q96A83 441 aa29.92■■■□□ 2.38
LDB1-204ENST00000490751 LINGO1Q96FE5 620 aa29.92■■■□□ 2.38
LDB1-204ENST00000490751 KRT12Q99456 494 aa29.92■■■□□ 2.38
LDB1-204ENST00000490751 SMAD5Q99717 465 aaKnown RBP29.92■■■□□ 2.38
LDB1-204ENST00000490751 CCDC177Q9NQR7 707 aaPredicted RBP29.92■■■□□ 2.38
LDB1-204ENST00000490751 PDE10AQ9Y233 779 aa29.92■■■□□ 2.38
LDB1-204ENST00000490751 RUVBL1Q9Y265 456 aaKnown RBP29.92■■■□□ 2.38
LDB1-204ENST00000490751 EFCAB8A8MWE9 144 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 AGPSO00116 658 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 DPM1O60762 260 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 EZRP15311 586 aaKnown RBP29.91■■■□□ 2.38
LDB1-204ENST00000490751 TBPL1P62380 186 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 SP140Q13342 867 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 HPS6Q86YV9 775 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 ANKMY2Q8IV38 441 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 PALM2Q8IXS6 379 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 GALNT16Q8N428 558 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 GPATCH11Q8N954 259 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 MIB2Q96AX9 1013 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 NACC2Q96BF6 587 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 CCDC138Q96M89 665 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 OR2A5Q96R48 311 aa29.91■■■□□ 2.38
LDB1-204ENST00000490751 NBASA2RRP1 2371 aa29.9■■■□□ 2.38
LDB1-204ENST00000490751 ASH1LQ9NR48 2969 aaKnown RBP29.9■■■□□ 2.38
LDB1-204ENST00000490751 VSTM2BA6NLU5 285 aa29.9■■■□□ 2.38
LDB1-204ENST00000490751 TTLL8A6PVC2 850 aa29.9■■■□□ 2.38
LDB1-204ENST00000490751 HAT1O14929 419 aa29.9■■■□□ 2.38
LDB1-204ENST00000490751 TP73O15350 636 aa29.9■■■□□ 2.38
LDB1-204ENST00000490751 EMP3P54852 163 aa29.9■■■□□ 2.38
LDB1-204ENST00000490751 PDAP1Q13442 181 aaKnown RBP29.9■■■□□ 2.38
LDB1-204ENST00000490751 HKDC1Q2TB90 917 aa29.9■■■□□ 2.38
LDB1-204ENST00000490751 VWA5B1Q5TIE3 1220 aa29.9■■■□□ 2.38
LDB1-204ENST00000490751 MBOAT1Q6ZNC8 495 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms