RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TIGD7Q6NT04 549 aaPredicted RBP6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 H3F3CQ6NXT2 135 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 SARM1Q6SZW1 724 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 TMEM205Q6UW68 189 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 PRSS57Q6UWY2 283 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 CAPN12Q6ZSI9 719 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 ARHGEF18Q6ZSZ5 1173 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 ACAD11Q709F0 780 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 ULK2Q8IYT8 1036 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 PHC3Q8NDX5 983 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 DENND1AQ8TEH3 1009 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 FATE1Q969F0 183 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 UTP4Q969X6 686 aaKnown RBP6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 RBM41Q96IZ5 413 aaKnown RBP6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 FERD3LQ96RJ6 166 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 OLFM1Q99784 485 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 HGH1Q9BTY7 390 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 SARGQ9BW04 601 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 STK33Q9BYT3 514 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 GPR63Q9BZJ6 419 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 CLSTN2Q9H4D0 955 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 ZWILCHQ9H900 591 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 UGT1A7Q9HAW7 530 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 UGT1A10Q9HAW8 530 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 UGT1A8Q9HAW9 530 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 GDPD2Q9HCC8 539 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 BPIFA1Q9NP55 256 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 RBM22Q9NW64 420 aaKnown RBP eCLIP6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 SMOXQ9NWM0 555 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 IL1RAPL1Q9NZN1 696 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 ZFATQ9P243 1243 aa6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 ZNF282Q9UDV7 671 aaPredicted RBP6.72□□□□□ -1.33
PDLIM1-203ENST00000490391 A0A0G2JNJ9 132 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 ANKRD62A6NC57 917 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 KLHL33A6NCF5 533 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 H3BRJ5 948 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 MFSD11O43934 449 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 NME2P1O60361 137 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 GFPT2O94808 682 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 IFNA2P01563 188 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 SP1P08047 785 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 CHRM5P08912 532 aaPredicted RBP6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 ICAM2P13598 275 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 TFEBP19484 476 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 MAGP20916 626 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 NME2P22392 152 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 PSMA2P25787 234 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 IL1R2P27930 398 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 SERPINB6P35237 376 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 HMGCLP35914 325 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 PEX19P40855 299 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 ZFP36L2P47974 494 aaKnown RBP6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 EMP2P54851 167 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 AP2B1P63010 937 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 OCA2Q04671 838 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 GALNT2Q10471 571 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 PRKG2Q13237 762 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 FASTKQ14296 549 aaKnown RBP6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 GRM7Q14831 915 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 LONRF2Q1L5Z9 754 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 SLC25A35Q3KQZ1 300 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 BCL7AQ4VC05 210 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 SLC25A25Q6KCM7 469 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 DCUN1D2Q6PH85 259 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 UNC5AQ6ZN44 842 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 DET1Q7L5Y6 550 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 HOOK3Q86VS8 718 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 ZNF227Q86WZ6 799 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 CRLF3Q8IUI8 442 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 LRRC49Q8IUZ0 686 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 CFAP206Q8IYR0 622 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 CNTD1Q8N815 330 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 FAM98AQ8NCA5 519 aaKnown RBP6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 HM13Q8TCT9 377 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 FAM46AQ96IP4 442 aaKnown RBP6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 UTP23Q9BRU9 249 aaKnown RBP6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 CCM2Q9BSQ5 444 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 TUBB6Q9BUF5 446 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 ADGRE3Q9BY15 652 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 TRIM7Q9C029 511 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 THAP2Q9H0W7 228 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 MVB12BQ9H7P6 319 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 NLRC4Q9NPP4 1024 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 Q9UFV3 132 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 KLHL20Q9Y2M5 609 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 FAM215AQ9Y5M1 114 aa6.71□□□□□ -1.34
PDLIM1-203ENST00000490391 USP27XA6NNY8 438 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 A8MUI8 341 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 SYT5O00445 386 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 RASGRF2O14827 1237 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 GLI4P10075 376 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 TCF4P15884 667 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 CXCR2P25025 360 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 PDHA2P29803 388 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 CD151P48509 253 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 MAMLD1Q13495 774 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 FAM182AQ5T1J6 154 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 RTL6Q6ICC9 239 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 ARHGAP11AQ6P4F7 1023 aa6.7□□□□□ -1.34
PDLIM1-203ENST00000490391 YTHDF3Q7Z739 585 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms