RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 MLIPQ5VWP3 458 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 ICE2Q659A1 982 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 SHISA6Q6ZSJ9 500 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 PRSS41Q7RTY9 318 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 CTAGE6Q86UF2 777 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 RAB43Q86YS6 212 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 PPIL6Q8IXY8 311 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 ZUFSPQ96AP4 578 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 SLC22A18Q96BI1 424 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 PSMG3-AS1Q96PY0 264 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 OLFM1Q99784 485 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 ZFYVE21Q9BQ24 234 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 SELENOSQ9BQE4 189 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 TRIM51Q9BSJ1 452 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 ACAT2Q9BWD1 397 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 IFT80Q9P2H3 777 aaPredicted RBP11.27□□□□□ -0.61
SRSF4-204ENST00000489898 ANKMY1Q9P2S6 941 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 TAC3Q9UHF0 121 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 PADI2Q9Y2J8 665 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 PSAT1Q9Y617 370 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 TEX264Q9Y6I9 313 aa11.27□□□□□ -0.61
SRSF4-204ENST00000489898 PDZD2O15018 2839 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 F8W8V4 182 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 H0YGG7 62 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 AGPSO00116 658 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 EIF3FO00303 357 aaPredicted RBP11.26□□□□□ -0.61
SRSF4-204ENST00000489898 FFAR3O14843 346 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 GPR42O15529 346 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 ERVK-10P10266 1014 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 COX6A1P12074 109 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 PGAM1P18669 254 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 ARF3P61204 181 aaPredicted RBP11.26□□□□□ -0.61
SRSF4-204ENST00000489898 TBPL1P62380 186 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 PRDX1Q06830 199 aaKnown RBP11.26□□□□□ -0.61
SRSF4-204ENST00000489898 GRM7Q14831 915 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 PPP1R3AQ16821 1122 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 TCTE1Q5JU00 501 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 WASHC2DQ5SRD0 308 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 YOD1Q5VVQ6 348 aaPredicted RBP11.26□□□□□ -0.61
SRSF4-204ENST00000489898 HIBCHQ6NVY1 386 aaPredicted RBP11.26□□□□□ -0.61
SRSF4-204ENST00000489898 TMEM207Q6UWW9 146 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 GALNT7Q86SF2 657 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 CUZD1Q86UP6 607 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 HOOK3Q86VS8 718 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 KCNMB4Q86W47 210 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 GALNT16Q8N428 558 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 OTUD6BQ8N6M0 293 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 OR11G2Q8NGC1 345 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 SMPDL3AQ92484 453 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 PSMF1Q92530 271 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 PNPLA2Q96AD5 504 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 EBNA1BP2Q99848 306 aaKnown RBP11.26□□□□□ -0.61
SRSF4-204ENST00000489898 NDC1Q9BTX1 674 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 SPNS1Q9H2V7 528 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 SOX17Q9H6I2 414 aaPredicted RBP11.26□□□□□ -0.61
SRSF4-204ENST00000489898 TRMT1Q9NXH9 659 aaKnown RBP11.26□□□□□ -0.61
SRSF4-204ENST00000489898 GPR83Q9NYM4 423 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 FBXL4Q9UKA2 621 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 SLC39A10Q9ULF5 831 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 PDE10AQ9Y233 779 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 PCDHGA10Q9Y5H3 936 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 MAU2Q9Y6X3 613 aa11.26□□□□□ -0.61
SRSF4-204ENST00000489898 EXPH5Q8NEV8 1989 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 OTOGQ6ZRI0 2925 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 E7ESA3 106 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 NRDCO43847 1150 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 KDM1AO60341 852 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 SRPX2O60687 465 aaPredicted RBP11.25□□□□□ -0.61
SRSF4-204ENST00000489898 SEC31AO94979 1220 aaKnown RBP11.25□□□□□ -0.61
SRSF4-204ENST00000489898 AHSGP02765 367 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 CELA2AP08217 269 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 ENO3P13929 434 aaPredicted RBP11.25□□□□□ -0.61
SRSF4-204ENST00000489898 CHRM3P20309 590 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 AGXTP21549 392 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 FDXRP22570 491 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 GNLYP22749 145 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 SOX11P35716 441 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 EMP3P54852 163 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 RELAQ04206 551 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 KLC1Q07866 573 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 ATG9BQ674R7 924 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 CASC4Q6P4E1 433 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 SBSNQ6UWP8 590 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 Q6ZS92 163 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 LAPTM4BQ86VI4 370 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 PDSS2Q86YH6 399 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 PLD3Q8IV08 490 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 ZC3H7AQ8IWR0 971 aaKnown RBP11.25□□□□□ -0.61
SRSF4-204ENST00000489898 LMNTD2Q8IXW0 634 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 TEX19Q8NA77 164 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.25□□□□□ -0.61
SRSF4-204ENST00000489898 CPT1CQ8TCG5 803 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 STT3BQ8TCJ2 826 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 PTERQ96BW5 349 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 C19orf60Q96EN9 201 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 CERS2Q96G23 380 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 OR4K3Q96R72 315 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 C17orf62Q9BQA9 187 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 SGPP1Q9BX95 441 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 AICDAQ9GZX7 198 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms