RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ECT2Q9H8V3 914 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 AKIRIN1Q9H9L7 192 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 STK26Q9P289 416 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 DHDHQ9UQ10 334 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 B3GALT5Q9Y2C3 310 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 KIF1BO60333 1816 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 TTC21BQ7Z4L5 1316 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 XRN1Q8IZH2 1706 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 NWD1Q149M9 1564 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 CPED1A4D0V7 1026 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ASB14A6NK59 587 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 FAM157AC9JC47 383 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 CHADO15335 359 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PPIP5K2O43314 1243 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PRAF2O60831 178 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 SCGB2A1O75556 95 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 JRKO75564 520 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 GLCEO94923 617 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 WNT1P04628 370 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 IQCF3P0C7M6 154 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 IRF1P10914 325 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ACTN1P12814 892 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ETFAP13804 333 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 CD22P20273 847 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 CYP2F1P24903 491 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ITGB8P26012 769 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PSMA5P28066 241 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 CDC25AP30304 524 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ARRB2P32121 409 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 HNRNPFP52597 415 aaKnown RBP3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 YWHAZP63104 245 aaKnown RBP3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PLD1Q13393 1074 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 SHBQ15464 509 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 CCDC152Q4G0S7 254 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 GLIPR1L2Q4G1C9 344 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 C6orf141Q5SZD1 244 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PRAMEF7Q5VXH5 474 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 AADACL2Q6P093 401 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PAPD4Q6PIY7 484 aaKnown RBP3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 FAM198BQ6UWH4 519 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 OTUD6AQ7L8S5 288 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ADGRD2Q7Z7M1 963 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM173Q86WV6 379 aaPredicted RBP3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 SLC22A9Q8IVM8 553 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ARID3BQ8IVW6 561 aaPredicted RBP3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PM20D2Q8IYS1 436 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 AMER3Q8N944 861 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 CCDC148Q8NFR7 591 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 SAP25Q8TEE9 199 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 FIG4Q92562 907 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 SPDL1Q96EA4 605 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 SGF29Q96ES7 293 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 GIMAP5Q96F15 307 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF479Q96JC4 524 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 SECISBP2Q96T21 854 aaKnown RBP3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ACOX2Q99424 681 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 C16orf70Q9BSU1 422 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ABHD14AQ9BUJ0 271 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 NCOR1P1Q9H4R4 102 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 BPIFA1Q9NP55 256 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 FZD3Q9NPG1 666 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PIH1D3Q9NQM4 214 aaKnown RBP3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PANK4Q9NVE7 773 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 OSER1Q9NX31 292 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 CWC15Q9P013 229 aaKnown RBP3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 VPS18Q9P253 973 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 SLC9A2Q9UBY0 812 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PCSK1NQ9UHG2 260 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 CFAP45Q9UL16 551 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 CCPG1Q9ULG6 757 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 SNX7Q9UNH6 387 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 GPR132Q9UNW8 380 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ITM2BQ9Y287 266 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 A3GALT2U3KPV4 340 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 LRPPRCP42704 1394 aaKnown RBP3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 ABCC11Q96J66 1382 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PIK3R4Q99570 1358 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 PRAG1Q86YV5 1406 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 MYOM2P54296 1465 aa3.05□□□□□ -1.92
DEPDC1-204ENST00000489862 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 A0A1W2PPK0 400 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM221A6NGB7 291 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ANKRD61A6NGH8 418 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SDR42E2A6NKP2 422 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 O00370 1275 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 TO15178 435 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SLC22A2O15244 555 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SLC28A2O43868 658 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ATP2C2O75185 946 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 SURF6O75683 361 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 IGHEP01854 428 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 LIPFP07098 398 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 NGFRP08138 427 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 CLUP10909 449 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 PLA2G2AP14555 144 aa3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 ARF4P18085 180 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-204ENST00000489862 DRD5P21918 477 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms