RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TMPRSS15P98073 1019 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 CUL2Q13617 745 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 TCEAL1Q15170 157 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 PCSK7Q16549 785 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 CLEC16AQ2KHT3 1053 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 ATP13A4Q4VNC1 1196 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 INO80DQ53TQ3 878 aaPredicted RBP7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 ACER2Q5QJU3 275 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 BEND6Q5SZJ8 279 aaPredicted RBP7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 C1orf185Q5T7R7 199 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 SEL1L2Q5TEA6 688 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 ACAD10Q6JQN1 1059 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 CCBE1Q6UXH8 406 aaPredicted RBP7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 WASH2PQ6VEQ5 465 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 NT5DC3Q86UY8 548 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 AMER2Q8N7J2 671 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 CASKIN2Q8WXE0 1202 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 KAT5Q92993 513 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 PIGQQ9BRB3 760 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 PLCD4Q9BRC7 762 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 UTP23Q9BRU9 249 aaKnown RBP7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 CRB3Q9BUF7 120 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 CARD9Q9H257 536 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 ARL15Q9NXU5 204 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 LCMT1Q9UIC8 334 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 POMT2Q9UKY4 750 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 PACSIN2Q9UNF0 486 aaPredicted RBP7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 TESMINQ9Y4I5 508 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 IGHV4-30-2A0A087WSY4 118 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 OR14I1A6ND48 311 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 GABRR3A8MPY1 467 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 PSMD11O00231 422 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 BCKDKO14874 412 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 NUAK1O60285 661 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 MAN1A2O60476 641 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 WDR1O75083 606 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 CYP1A2P05177 515 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 THBS1P07996 1170 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 ST6GAL1P15907 406 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 CHRNB2P17787 502 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 LHCGRP22888 699 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 CETN2P41208 172 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 RPL34P49207 117 aaKnown RBP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 ST13P50502 369 aaKnown RBP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 FMO1Q01740 532 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 GABPB1Q06547 395 aaPredicted RBP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 FOXO1Q12778 655 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 FASTKQ14296 549 aaKnown RBP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 MAPKAPK3Q16644 382 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 EMBQ6PCB8 327 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 FIGLAQ6QHK4 219 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 TMEM270Q6UE05 265 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 LCLAT1Q6UWP7 414 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 LRRC31Q6UY01 552 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 SEM1Q6ZVN7 128 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 MAATS1Q7Z4T9 603 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 ZNF655Q8N720 491 aaPredicted RBP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 OR52N2Q8NGI0 321 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 C16orf52Q8NHV5 167 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 CREB3L4Q8TEY5 395 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 MAIP1Q8WWC4 291 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 PIK3IP1Q96FE7 263 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 HES6Q96HZ4 224 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 MS4A14Q96JA4 679 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 SCYL1Q96KG9 808 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 RUNDC3BQ96NL0 473 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 KRT12Q99456 494 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 LRRC1Q9BTT6 524 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 NUP85Q9BW27 656 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 RBM4Q9BWF3 364 aaKnown RBP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 FUT8Q9BYC5 575 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 PHACTR1Q9C0D0 580 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 VIPAS39Q9H9C1 493 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 ZFYVE1Q9HBF4 777 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 MRPL47Q9HD33 250 aaKnown RBP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 RIC8BQ9NVN3 520 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 NKX1-2Q9UD57 310 aaPredicted RBP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 ZNF629Q9UEG4 869 aaPredicted RBP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 CD84Q9UIB8 345 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 TTC7AQ9ULT0 858 aaPredicted RBP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 HPCAL4Q9UM19 191 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 PTGDR2Q9Y5Y4 395 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 SCINQ9Y6U3 715 aa7.03□□□□□ -1.28
EXOSC3-206ENST00000489414 GSAPA4D1B5 854 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 OVOL3O00110 214 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 MED7O43513 233 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 HCRTR1O43613 425 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 KDELR3O43731 214 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 OR10H2O60403 315 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 SLC25A12O75746 678 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 SUN1O94901 812 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 LSM8O95777 96 aaKnown RBP7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 PYGLP06737 847 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 CTSBP07858 339 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 TPH1P17752 444 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 SERPINA4P29622 427 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 GNA15P30679 374 aa7.02□□□□□ -1.29
EXOSC3-206ENST00000489414 RFC3P40938 356 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms