RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 SLC12A2P55011 1212 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 CBLBQ13191 982 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 FASTKD3Q14CZ7 662 aaKnown RBP12.93□□□□□ -0.34
LMO4-203ENST00000489303 NKAIN1Q4KMZ8 207 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 WASHC2DQ5SRD0 308 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 ZNF385CQ66K41 422 aaPredicted RBP12.93□□□□□ -0.34
LMO4-203ENST00000489303 DUPD1Q68J44 220 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 CAPN12Q6ZSI9 719 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 RNF44Q7L0R7 432 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 ADCK2Q7Z695 626 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 ZNF592Q92610 1267 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 IP6K3Q96PC2 410 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 PLCD4Q9BRC7 762 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 PCBD2Q9H0N5 130 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 CCDC177Q9NQR7 707 aaPredicted RBP12.93□□□□□ -0.34
LMO4-203ENST00000489303 ACSS2Q9NR19 701 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 MOCS1Q9NZB8 636 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 SLC17A6Q9P2U8 582 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 CDC23Q9UJX2 597 aa12.93□□□□□ -0.34
LMO4-203ENST00000489303 G3BP2Q9UN86 482 aaKnown RBP12.93□□□□□ -0.34
LMO4-203ENST00000489303 FLNCQ14315 2725 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 HYKKA2RU49 373 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 OR2A25A4D2G3 310 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 FITM1A5D6W6 292 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 DSCR3O14972 297 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 CTSVO60911 334 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 TUBB4AP04350 444 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 CAPN1P07384 714 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 CTSBP07858 339 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 GSTA2P09210 222 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 FDXRP22570 491 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 CCND1P24385 295 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 IMPA1P29218 277 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 RRADP55042 308 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 PLTPP55058 493 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 TIAL1Q01085 375 aaKnown RBP eCLIP12.92□□□□□ -0.34
LMO4-203ENST00000489303 SRSF1Q07955 248 aaKnown RBP eCLIP12.92□□□□□ -0.34
LMO4-203ENST00000489303 IL10RAQ13651 578 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 SSPNQ14714 243 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 WHAMMP3Q1A5X7 153 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 C8orf74Q6P047 294 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 ZNF572Q7Z3I7 529 aaPredicted RBP12.92□□□□□ -0.34
LMO4-203ENST00000489303 APLFQ8IW19 511 aaPredicted RBP12.92□□□□□ -0.34
LMO4-203ENST00000489303 NKAPQ8N5F7 415 aaKnown RBP12.92□□□□□ -0.34
LMO4-203ENST00000489303 RERGQ96A58 199 aaPredicted RBP12.92□□□□□ -0.34
LMO4-203ENST00000489303 ZNF285Q96NJ3 590 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 SLC6A20Q9NP91 592 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 STOX2Q9P2F5 926 aaPredicted RBP12.92□□□□□ -0.34
LMO4-203ENST00000489303 ADAMTS6Q9UKP5 1117 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 PDE10AQ9Y233 779 aa12.92□□□□□ -0.34
LMO4-203ENST00000489303 PTRH2Q9Y3E5 179 aaKnown RBP12.92□□□□□ -0.34
LMO4-203ENST00000489303 FAM95CA0A1B0GW59 222 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 ARGFXA6NJG6 315 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 PEX12O00623 359 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 TXNDC9O14530 226 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 IGHEP01854 428 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 PDGFAP04085 211 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 ENO2P09104 434 aaPredicted RBP12.91□□□□□ -0.34
LMO4-203ENST00000489303 EZRP15311 586 aaKnown RBP12.91□□□□□ -0.34
LMO4-203ENST00000489303 OTX2P32243 289 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 AP1S2P56377 157 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 SLC9A5Q14940 896 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 MUM1Q2TAK8 710 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 LACTB2Q53H82 288 aaPredicted RBP12.91□□□□□ -0.34
LMO4-203ENST00000489303 PRAMEF13Q5VWM6 474 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 FRMPD2BQ6IN97 320 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 FBXO42Q6P3S6 717 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 AGTRAPQ6RW13 159 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 ZC3HC1Q86WB0 502 aaKnown RBP12.91□□□□□ -0.34
LMO4-203ENST00000489303 PAQR7Q86WK9 346 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 CCDC25Q86WR0 208 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 ATL1Q8WXF7 558 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 FKBP10Q96AY3 582 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 ALKBH8Q96BT7 664 aaKnown RBP12.91□□□□□ -0.34
LMO4-203ENST00000489303 PTERQ96BW5 349 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 OLFM1Q99784 485 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 PHACTR1Q9C0D0 580 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 ING2Q9H160 280 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 RHOJQ9H4E5 214 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 ENAMQ9NRM1 1142 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 ARL15Q9NXU5 204 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 GRHL1Q9NZI5 618 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 CDC14AQ9UNH5 594 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 PLAAQ9Y263 795 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 TP53TG5Q9Y2B4 290 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 MAST4O15021 2626 aa12.91□□□□□ -0.34
LMO4-203ENST00000489303 LOC105369274A0A096LPK9 316 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 LOC102723532A0A0G2JNH3 316 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 H0YGG7 62 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 KIF2AO00139 706 aaPredicted RBP12.9□□□□□ -0.34
LMO4-203ENST00000489303 PRPF4O43172 522 aaKnown RBP eCLIP12.9□□□□□ -0.34
LMO4-203ENST00000489303 DNAJB5O75953 348 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 ALBP02768 609 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 SSTR1P30872 391 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 GRK3P35626 688 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 CASRP41180 1078 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 EMP3P54852 163 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 ARF3P61204 181 aaPredicted RBP12.9□□□□□ -0.34
LMO4-203ENST00000489303 TBPL1P62380 186 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 YBX1P67809 324 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms