RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 FKRPQ9H9S5 495 aa3.99□□□□□ -1.77
XRN1-213ENST00000489241 EBF2Q9HAK2 575 aa3.99□□□□□ -1.77
XRN1-213ENST00000489241 RNPEPL1Q9HAU8 725 aa3.99□□□□□ -1.77
XRN1-213ENST00000489241 A4GALTQ9NPC4 353 aa3.99□□□□□ -1.77
XRN1-213ENST00000489241 OLFML3Q9NRN5 406 aa3.99□□□□□ -1.77
XRN1-213ENST00000489241 PTTG2Q9NZH5 202 aa3.99□□□□□ -1.77
XRN1-213ENST00000489241 FETUBQ9UGM5 382 aa3.99□□□□□ -1.77
XRN1-213ENST00000489241 TRIM17Q9Y577 477 aa3.99□□□□□ -1.77
XRN1-213ENST00000489241 ILVBLA1L0T0 632 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 PRSS46E5RG02 174 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 H0YIG0 161 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 SNX3O60493 162 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 SEC22BO75396 215 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 GLCEO94923 617 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 BAG4O95429 457 aaKnown RBP3.98□□□□□ -1.77
XRN1-213ENST00000489241 GAP43P17677 238 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 TYMPP19971 482 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 CD86P42081 329 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 IER3P46695 156 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 OR3A1P47881 315 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 NPBWR1P48145 328 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 SERPINH1P50454 418 aaKnown RBP3.98□□□□□ -1.77
XRN1-213ENST00000489241 FUT6P51993 359 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 PDX1P52945 283 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 UCP2P55851 309 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 MBTD1Q05BQ5 628 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 NONOQ15233 471 aaKnown RBP eCLIP3.98□□□□□ -1.77
XRN1-213ENST00000489241 UGP2Q16851 508 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 ITPRIPL2Q3MIP1 535 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 CORO6Q6QEF8 472 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 AMIGO1Q86WK6 493 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 MEX3DQ86XN8 651 aaKnown RBP3.98□□□□□ -1.77
XRN1-213ENST00000489241 LRRC8CQ8TDW0 803 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 GRHL3Q8TE85 626 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 PYCR2Q96C36 320 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 TBC1D31Q96DN5 1066 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 C17orf77Q96MU5 243 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 GDAP1L1Q96MZ0 367 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 IL17FQ96PD4 163 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 SPXQ9BT56 116 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 POLR3CQ9BUI4 534 aaPredicted RBP3.98□□□□□ -1.77
XRN1-213ENST00000489241 EVA1AQ9H8M9 152 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 AKIRIN1Q9H9L7 192 aaPredicted RBP3.98□□□□□ -1.77
XRN1-213ENST00000489241 APOBEC3GQ9HC16 384 aaKnown RBP3.98□□□□□ -1.77
XRN1-213ENST00000489241 TCF7L2Q9NQB0 619 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 PHPT1Q9NRX4 125 aaPredicted RBP3.98□□□□□ -1.77
XRN1-213ENST00000489241 SLC38A7Q9NVC3 462 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 ANO10Q9NW15 660 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 COMMD8Q9NX08 183 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 IL19Q9UHD0 177 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 GMEB2Q9UKD1 530 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 KLK4Q9Y5K2 254 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 TEX264Q9Y6I9 313 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 TAF1P21675 1872 aa3.98□□□□□ -1.77
XRN1-213ENST00000489241 NOTCH4Q99466 2003 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 ATP9AO75110 1047 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 MOCS2O96007 188 aaPredicted RBP3.97□□□□□ -1.77
XRN1-213ENST00000489241 SERPING1P05155 500 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 STAG3L1P0CL83 205 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 PCP11498 1178 aaKnown RBP3.97□□□□□ -1.77
XRN1-213ENST00000489241 PIK3R1P27986 724 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 MAGEB1P43366 347 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 VAMP7P51809 220 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 B3GALT5-AS1P59052 145 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 HYAL1Q12794 435 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 ODF4Q2M2E3 257 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 ASPRV1Q53RT3 343 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 FAM46CQ5VWP2 391 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.97□□□□□ -1.77
XRN1-213ENST00000489241 PRSS42Q7Z5A4 293 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 ANKRD46Q86W74 232 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 KLHDC8AQ8IYD2 350 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 LGI2Q8N0V4 545 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 NAGSQ8N159 534 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 OR10Q1Q8NGQ4 319 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 SECTM1Q8WVN6 248 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 SORCS1Q8WY21 1168 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 AP2M1Q96CW1 435 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 RTP3Q9BQQ7 232 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 CDK19Q9BWU1 502 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 TLE6Q9H808 572 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 SPHK1Q9NYA1 384 aa3.97□□□□□ -1.77
XRN1-213ENST00000489241 A0A1W2PPI3 338 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 KRT87PA6NCN2 255 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 ASPDHA6ND91 283 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 PRAC2D3DTV9 90 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 F8VVB4 439 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 F8VWA3 439 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 TULP2O00295 520 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 ARPC2O15144 300 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 SYNGR3O43761 229 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 CTSVO60911 334 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 B3GALNT1O75752 331 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 RAD51DO75771 328 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 SBK2P0C263 348 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 CYP2A7P20853 494 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 GAS1P54826 345 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 CASP9P55211 416 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 RPL36AP83881 106 aaKnown RBP3.96□□□□□ -1.78
XRN1-213ENST00000489241 CACNG1Q06432 222 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms